Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MINOS1P3-201ENST00000457048 203 ntBASIC20.94■□□□□ 0.94
HOXC6P09630 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.94■□□□□ 0.94
HOXC6P09630 BNIP3P18-201ENST00000593976 575 ntBASIC20.94■□□□□ 0.94
HOXC6P09630 AL773604.1-201ENST00000617417 272 ntBASIC20.94■□□□□ 0.94
HOXC6P09630 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXC6P09630 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HOXC6P09630 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HOXC6P09630 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
HOXC6P09630 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.94■□□□□ 0.94
HOXC6P09630 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HOXC6P09630 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HOXC6P09630 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.93■□□□□ 0.94
HOXC6P09630 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC6P09630 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC6P09630 MIR574-201ENST00000385209 96 ntBASIC20.93■□□□□ 0.94
HOXC6P09630 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC6P09630 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.93■□□□□ 0.94
HOXC6P09630 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.93■□□□□ 0.94
HOXC6P09630 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
HOXC6P09630 AF228730.7-201ENST00000641842 219 ntBASIC20.93■□□□□ 0.94
HOXC6P09630 IL9RP2-201ENST00000423948 1312 ntBASIC20.93■□□□□ 0.94
HOXC6P09630 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC6P09630 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.93■□□□□ 0.94
HOXC6P09630 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HOXC6P09630 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.93■□□□□ 0.94
HOXC6P09630 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC6P09630 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC6P09630 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXC6P09630 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXC6P09630 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HOXC6P09630 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.92■□□□□ 0.94
HOXC6P09630 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.92■□□□□ 0.94
HOXC6P09630 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.92■□□□□ 0.94
HOXC6P09630 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.92■□□□□ 0.94
HOXC6P09630 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
HOXC6P09630 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HOXC6P09630 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC6P09630 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC6P09630 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC6P09630 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.91■□□□□ 0.94
HOXC6P09630 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC6P09630 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC6P09630 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC6P09630 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
HOXC6P09630 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HOXC6P09630 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC6P09630 KRT18P67-201ENST00000432816 1264 ntBASIC20.91■□□□□ 0.94
HOXC6P09630 FAM197Y8-203ENST00000450145 560 ntBASIC20.91■□□□□ 0.94
HOXC6P09630 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HOXC6P09630 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC6P09630 KRT8P50-201ENST00000562022 1438 ntBASIC20.91■□□□□ 0.94
HOXC6P09630 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC6P09630 MIR5100-201ENST00000579544 119 ntBASIC20.91■□□□□ 0.94
HOXC6P09630 Z98044.1-201ENST00000632503 1764 ntBASIC20.91■□□□□ 0.94
HOXC6P09630 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.91■□□□□ 0.94
HOXC6P09630 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
HOXC6P09630 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC6P09630 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.9■□□□□ 0.94
HOXC6P09630 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC6P09630 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC6P09630 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC6P09630 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXC6P09630 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC6P09630 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC6P09630 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.9■□□□□ 0.94
HOXC6P09630 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.9■□□□□ 0.94
HOXC6P09630 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.9■□□□□ 0.94
HOXC6P09630 KRT18P41-201ENST00000518924 1277 ntBASIC20.9■□□□□ 0.94
HOXC6P09630 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC6P09630 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.9■□□□□ 0.94
HOXC6P09630 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC6P09630 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HOXC6P09630 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
HOXC6P09630 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
HOXC6P09630 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
HOXC6P09630 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC6P09630 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.89■□□□□ 0.93
HOXC6P09630 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HOXC6P09630 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms