Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.66■□□□□ 0.58
COL4A2P08572 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.66■□□□□ 0.58
COL4A2P08572 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.66■□□□□ 0.58
COL4A2P08572 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.66■□□□□ 0.58
COL4A2P08572 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.66■□□□□ 0.58
COL4A2P08572 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A2P08572 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.65■□□□□ 0.58
COL4A2P08572 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
COL4A2P08572 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A2P08572 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A2P08572 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
COL4A2P08572 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.65■□□□□ 0.58
COL4A2P08572 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.65■□□□□ 0.58
COL4A2P08572 AL163051.1-201ENST00000569214 1512 ntBASIC18.65■□□□□ 0.58
COL4A2P08572 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A2P08572 AC112777.1-201ENST00000540175 1423 ntBASIC18.65■□□□□ 0.58
COL4A2P08572 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A2P08572 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A2P08572 RBM17P3-201ENST00000417687 1192 ntBASIC18.65■□□□□ 0.58
COL4A2P08572 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
COL4A2P08572 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A2P08572 AL591684.3-201ENST00000605187 298 ntBASIC18.65■□□□□ 0.58
COL4A2P08572 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.65■□□□□ 0.58
COL4A2P08572 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL4A2P08572 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.65■□□□□ 0.58
COL4A2P08572 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
COL4A2P08572 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL4A2P08572 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.64■□□□□ 0.57
COL4A2P08572 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
COL4A2P08572 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL4A2P08572 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.64■□□□□ 0.57
COL4A2P08572 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
COL4A2P08572 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL4A2P08572 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.64■□□□□ 0.57
COL4A2P08572 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.64■□□□□ 0.57
COL4A2P08572 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.64■□□□□ 0.57
COL4A2P08572 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.64■□□□□ 0.57
COL4A2P08572 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.64■□□□□ 0.57
COL4A2P08572 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL4A2P08572 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL4A2P08572 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.64■□□□□ 0.57
COL4A2P08572 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.64■□□□□ 0.57
COL4A2P08572 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.64■□□□□ 0.57
COL4A2P08572 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.64■□□□□ 0.57
COL4A2P08572 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL4A2P08572 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
COL4A2P08572 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.64■□□□□ 0.57
COL4A2P08572 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
COL4A2P08572 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.63■□□□□ 0.57
COL4A2P08572 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.63■□□□□ 0.57
COL4A2P08572 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.63■□□□□ 0.57
COL4A2P08572 AC092865.5-201ENST00000545435 363 ntBASIC18.63■□□□□ 0.57
COL4A2P08572 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.63■□□□□ 0.57
COL4A2P08572 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.63■□□□□ 0.57
COL4A2P08572 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
COL4A2P08572 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.63■□□□□ 0.57
COL4A2P08572 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.63■□□□□ 0.57
COL4A2P08572 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
COL4A2P08572 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.63■□□□□ 0.57
COL4A2P08572 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.63■□□□□ 0.57
COL4A2P08572 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.63■□□□□ 0.57
COL4A2P08572 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.63■□□□□ 0.57
COL4A2P08572 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.63■□□□□ 0.57
COL4A2P08572 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.63■□□□□ 0.57
COL4A2P08572 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
COL4A2P08572 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.63■□□□□ 0.57
COL4A2P08572 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL4A2P08572 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
COL4A2P08572 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
COL4A2P08572 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.62■□□□□ 0.57
COL4A2P08572 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL4A2P08572 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL4A2P08572 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL4A2P08572 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms