Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.31■□□□□ 0.84
VTNP04004 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
VTNP04004 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.31■□□□□ 0.84
VTNP04004 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.31■□□□□ 0.84
VTNP04004 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.31■□□□□ 0.84
VTNP04004 KRT18P41-201ENST00000518924 1277 ntBASIC20.31■□□□□ 0.84
VTNP04004 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.31■□□□□ 0.84
VTNP04004 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
VTNP04004 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.31■□□□□ 0.84
VTNP04004 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.31■□□□□ 0.84
VTNP04004 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.31■□□□□ 0.84
VTNP04004 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.31■□□□□ 0.84
VTNP04004 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.31■□□□□ 0.84
VTNP04004 AL390719.2-201ENST00000606993 987 ntBASIC20.31■□□□□ 0.84
VTNP04004 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.31■□□□□ 0.84
VTNP04004 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
VTNP04004 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.31■□□□□ 0.84
VTNP04004 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 AL163051.1-201ENST00000569214 1512 ntBASIC20.31■□□□□ 0.84
VTNP04004 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VTNP04004 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
VTNP04004 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.3■□□□□ 0.84
VTNP04004 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
VTNP04004 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.3■□□□□ 0.84
VTNP04004 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.3■□□□□ 0.84
VTNP04004 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.3■□□□□ 0.84
VTNP04004 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.3■□□□□ 0.84
VTNP04004 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.3■□□□□ 0.84
VTNP04004 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
VTNP04004 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.3■□□□□ 0.84
VTNP04004 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.3■□□□□ 0.84
VTNP04004 PRELID1P1-202ENST00000567272 903 ntBASIC20.3■□□□□ 0.84
VTNP04004 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.3■□□□□ 0.84
VTNP04004 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.3■□□□□ 0.84
VTNP04004 AC024563.2-201ENST00000603282 481 ntBASIC20.3■□□□□ 0.84
VTNP04004 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
VTNP04004 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
VTNP04004 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
VTNP04004 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.3■□□□□ 0.84
VTNP04004 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.3■□□□□ 0.84
VTNP04004 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VTNP04004 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.29■□□□□ 0.84
VTNP04004 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.29■□□□□ 0.84
VTNP04004 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
VTNP04004 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.29■□□□□ 0.84
VTNP04004 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.29■□□□□ 0.84
VTNP04004 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.29■□□□□ 0.84
VTNP04004 TPSP2-201ENST00000561760 610 ntBASIC20.29■□□□□ 0.84
VTNP04004 AC009065.1-201ENST00000564055 1225 ntBASIC20.29■□□□□ 0.84
VTNP04004 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.29■□□□□ 0.84
VTNP04004 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.29■□□□□ 0.84
VTNP04004 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.29■□□□□ 0.84
VTNP04004 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
VTNP04004 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VTNP04004 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTNP04004 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
VTNP04004 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.28■□□□□ 0.84
VTNP04004 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTNP04004 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTNP04004 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTNP04004 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.28■□□□□ 0.84
VTNP04004 IGHGP-201ENST00000390555 1178 ntBASIC20.28■□□□□ 0.84
VTNP04004 AP000593.1-201ENST00000393668 712 ntBASIC20.28■□□□□ 0.84
VTNP04004 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.28■□□□□ 0.84
VTNP04004 LINC00265-3P-201ENST00000447588 903 ntBASIC20.28■□□□□ 0.84
VTNP04004 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.28■□□□□ 0.84
VTNP04004 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.28■□□□□ 0.84
VTNP04004 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.28■□□□□ 0.84
VTNP04004 GPR32P1-201ENST00000601788 811 ntBASIC20.28■□□□□ 0.84
VTNP04004 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VTNP04004 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.28■□□□□ 0.84
VTNP04004 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
VTNP04004 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms