Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.44■□□□□ 0.38
SNX4O95219 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX4O95219 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.44■□□□□ 0.38
SNX4O95219 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX4O95219 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.44■□□□□ 0.38
SNX4O95219 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.44■□□□□ 0.38
SNX4O95219 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
SNX4O95219 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SNX4O95219 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNX4O95219 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SNX4O95219 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX4O95219 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX4O95219 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX4O95219 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX4O95219 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SNX4O95219 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX4O95219 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX4O95219 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SNX4O95219 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.43■□□□□ 0.38
SNX4O95219 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX4O95219 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX4O95219 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX4O95219 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNX4O95219 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.43■□□□□ 0.38
SNX4O95219 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SNX4O95219 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX4O95219 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNX4O95219 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 AC090164.3-201ENST00000610780 2143 ntBASIC17.42■□□□□ 0.38
SNX4O95219 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX4O95219 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX4O95219 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.42■□□□□ 0.38
SNX4O95219 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 TSPY23P-201ENST00000440136 739 ntBASIC17.42■□□□□ 0.38
SNX4O95219 TSPY17P-201ENST00000450329 467 ntBASIC17.42■□□□□ 0.38
SNX4O95219 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.42■□□□□ 0.38
SNX4O95219 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.42■□□□□ 0.38
SNX4O95219 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SNX4O95219 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SNX4O95219 AC005363.2-201ENST00000618631 242 ntBASIC17.42■□□□□ 0.38
SNX4O95219 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.42■□□□□ 0.38
SNX4O95219 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.42■□□□□ 0.38
SNX4O95219 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 BICD1-207ENST00000551848 1962 ntBASIC17.42■□□□□ 0.38
SNX4O95219 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SNX4O95219 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNX4O95219 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNX4O95219 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX4O95219 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX4O95219 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX4O95219 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX4O95219 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.41■□□□□ 0.38
SNX4O95219 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SNX4O95219 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SNX4O95219 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNX4O95219 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.41■□□□□ 0.38
SNX4O95219 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms