Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.59■□□□□ 0.57
SHOX2O60902 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHOX2O60902 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOX2O60902 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.59■□□□□ 0.57
SHOX2O60902 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.59■□□□□ 0.57
SHOX2O60902 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOX2O60902 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOX2O60902 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SHOX2O60902 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.59■□□□□ 0.57
SHOX2O60902 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SHOX2O60902 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SHOX2O60902 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.59■□□□□ 0.57
SHOX2O60902 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SHOX2O60902 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SHOX2O60902 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.58■□□□□ 0.57
SHOX2O60902 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SHOX2O60902 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SHOX2O60902 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SHOX2O60902 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.58■□□□□ 0.57
SHOX2O60902 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.58■□□□□ 0.57
SHOX2O60902 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.58■□□□□ 0.57
SHOX2O60902 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.58■□□□□ 0.57
SHOX2O60902 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SHOX2O60902 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SHOX2O60902 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SHOX2O60902 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.58■□□□□ 0.56
SHOX2O60902 TERF1P5-201ENST00000477545 1207 ntBASIC18.58■□□□□ 0.56
SHOX2O60902 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.58■□□□□ 0.56
SHOX2O60902 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.58■□□□□ 0.56
SHOX2O60902 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.58■□□□□ 0.56
SHOX2O60902 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
SHOX2O60902 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SHOX2O60902 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.57■□□□□ 0.56
SHOX2O60902 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHOX2O60902 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.57■□□□□ 0.56
SHOX2O60902 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.57■□□□□ 0.56
SHOX2O60902 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.57■□□□□ 0.56
SHOX2O60902 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SHOX2O60902 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.57■□□□□ 0.56
SHOX2O60902 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.57■□□□□ 0.56
SHOX2O60902 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.57■□□□□ 0.56
SHOX2O60902 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
SHOX2O60902 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SHOX2O60902 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHOX2O60902 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHOX2O60902 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHOX2O60902 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHOX2O60902 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.56■□□□□ 0.56
SHOX2O60902 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SHOX2O60902 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.56■□□□□ 0.56
SHOX2O60902 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
SHOX2O60902 KRT19P1-201ENST00000405746 1186 ntBASIC18.56■□□□□ 0.56
SHOX2O60902 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.56■□□□□ 0.56
SHOX2O60902 AC007322.4-201ENST00000509611 723 ntBASIC18.56■□□□□ 0.56
SHOX2O60902 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SHOX2O60902 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
SHOX2O60902 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHOX2O60902 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SHOX2O60902 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SHOX2O60902 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.56■□□□□ 0.56
SHOX2O60902 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms