Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 AC139887.3-201ENST00000568585 713 ntBASIC18.12■□□□□ 0.49
C4orf47A7E2U8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 AL049840.3-201ENST00000602669 611 ntBASIC18.12■□□□□ 0.49
C4orf47A7E2U8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 AL109659.2-201ENST00000606809 1674 ntBASIC18.12■□□□□ 0.49
C4orf47A7E2U8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C4orf47A7E2U8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 AC008556.1-201ENST00000610908 2040 ntBASIC18.11■□□□□ 0.49
C4orf47A7E2U8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 MIR5100-201ENST00000579544 119 ntBASIC18.11■□□□□ 0.49
C4orf47A7E2U8 AC024563.2-201ENST00000603282 481 ntBASIC18.11■□□□□ 0.49
C4orf47A7E2U8 AL355385.1-201ENST00000606123 409 ntBASIC18.11■□□□□ 0.49
C4orf47A7E2U8 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C4orf47A7E2U8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 RCC2P3-201ENST00000418112 1537 ntBASIC18.1■□□□□ 0.49
C4orf47A7E2U8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 MIR564-202ENST00000385049 94 ntBASIC18.1■□□□□ 0.49
C4orf47A7E2U8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 AC008608.2-201ENST00000606089 416 ntBASIC18.1■□□□□ 0.49
C4orf47A7E2U8 AC055717.3-201ENST00000622967 595 ntBASIC18.1■□□□□ 0.49
C4orf47A7E2U8 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C4orf47A7E2U8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
C4orf47A7E2U8 AL353692.3-201ENST00000407031 1396 ntBASIC18.09■□□□□ 0.49
C4orf47A7E2U8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms