Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 DUSP5P2-201ENST00000426873 1033 ntBASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 KRT18P41-201ENST00000518924 1277 ntBASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV3S1A0A5B6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 AC105036.2-201ENST00000569468 176 ntBASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.37■□□□□ 0.37
TCRBV3S1A0A5B6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 AP001094.4-201ENST00000579008 2176 ntBASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 AF201337.1-201ENST00000520239 748 ntBASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 C1QL1P1-201ENST00000568105 661 ntBASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 HTR7P1-201ENST00000538670 1336 ntBASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 AL023806.1-201ENST00000603994 1649 ntBASIC17.36■□□□□ 0.37
TCRBV3S1A0A5B6 NKILA-202ENST00000614771 2598 ntBASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 AC087623.3-201ENST00000607047 1098 ntBASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 MIR6821-201ENST00000617625 74 ntBASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 AC092368.3-202ENST00000574180 1591 ntBASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.35■□□□□ 0.37
TCRBV3S1A0A5B6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms