Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 AC091390.4-202ENST00000476426 537 ntBASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 AC012313.1-201ENST00000593393 3059 ntBASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CAPN6Q9Y6Q1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 AC239809.2-201ENST00000415381 517 ntBASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 HTR7P1-201ENST00000538670 1336 ntBASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CAPN6Q9Y6Q1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CAPN6Q9Y6Q1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 NIFKP9-201ENST00000419265 221 ntBASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 KRT17P3-201ENST00000420566 1262 ntBASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 SLC25A6P5-201ENST00000435663 894 ntBASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 AC131212.4-201ENST00000623606 975 ntBASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CAPN6Q9Y6Q1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPN6Q9Y6Q1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.66■□□□□ 0.74
CAPN6Q9Y6Q1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN6Q9Y6Q1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CAPN6Q9Y6Q1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms