Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 AC116351.2-201ENST00000606540 1585 ntBASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 AL359736.2-201ENST00000621992 437 ntBASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 FAM197Y4-202ENST00000622692 608 ntBASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 AL023875.1-201ENST00000640777 796 ntBASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP4B1Q9Y6B7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 ZNF815P-204ENST00000434898 1737 ntBASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 AL158047.1-201ENST00000445918 881 ntBASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
AP4B1Q9Y6B7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP4B1Q9Y6B7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
AP4B1Q9Y6B7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP4B1Q9Y6B7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP4B1Q9Y6B7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP4B1Q9Y6B7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP4B1Q9Y6B7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP4B1Q9Y6B7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 AC124016.1-201ENST00000609552 612 ntBASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.83■□□□□ 0.44
AP4B1Q9Y6B7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 AC084018.2-201ENST00000613093 2607 ntBASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.82■□□□□ 0.44
AP4B1Q9Y6B7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms