Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 AC093677.2-201ENST00000600169 1863 ntBASIC21.22■□□□□ 0.99
CLIC4Q9Y696 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 TSPY7P-201ENST00000431358 1114 ntBASIC21.21■□□□□ 0.99
CLIC4Q9Y696 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CLIC4Q9Y696 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.2■□□□□ 0.99
CLIC4Q9Y696 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CLIC4Q9Y696 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CLIC4Q9Y696 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 AC008550.1-201ENST00000511500 884 ntBASIC21.2■□□□□ 0.98
CLIC4Q9Y696 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.2■□□□□ 0.98
CLIC4Q9Y696 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 RBM17P1-201ENST00000453646 1190 ntBASIC21.19■□□□□ 0.98
CLIC4Q9Y696 CA15P1-201ENST00000481698 905 ntBASIC21.19■□□□□ 0.98
CLIC4Q9Y696 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.19■□□□□ 0.98
CLIC4Q9Y696 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms