Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 MIR149-201ENST00000384879 89 ntBASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 AL591684.3-201ENST00000605187 298 ntBASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 AC092865.5-201ENST00000545435 363 ntBASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC28.01■■■□□ 2.07
CDC42BPBQ9Y5S2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 COX10-202ENST00000429152 875 ntTSL 2 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC28■■■□□ 2.07
CDC42BPBQ9Y5S2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 AL163051.1-201ENST00000569214 1512 ntBASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 AC112777.1-201ENST00000540175 1423 ntBASIC27.99■■■□□ 2.07
CDC42BPBQ9Y5S2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 RBM17P3-201ENST00000417687 1192 ntBASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 MIR5100-201ENST00000579544 119 ntBASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC27.98■■■□□ 2.07
CDC42BPBQ9Y5S2 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
CDC42BPBQ9Y5S2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CDC42BPBQ9Y5S2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms