Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHB13Q9Y5F0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB13Q9Y5F0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB13Q9Y5F0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB13Q9Y5F0 KRT8P7-201ENST00000533003 1432 ntBASIC20.51■□□□□ 0.87
PCDHB13Q9Y5F0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDHB13Q9Y5F0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB13Q9Y5F0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHB13Q9Y5F0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 AC138932.1-201ENST00000534164 6830 ntBASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHB13Q9Y5F0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 AP000593.1-201ENST00000393668 712 ntBASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 SLC25A3P1-201ENST00000443844 931 ntBASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 HOXB1-202ENST00000577092 1414 ntBASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 AL499627.1-201ENST00000569373 2188 ntBASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHB13Q9Y5F0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 LINC01023-201ENST00000606054 436 ntBASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHB13Q9Y5F0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 AC005363.2-201ENST00000618631 242 ntBASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHB13Q9Y5F0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms