Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 FP475955.4-201ENST00000623131 1990 ntBASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RTCBQ9Y3I0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 LINC01521-201ENST00000504184 1943 ntBASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 FGFR3P6-201ENST00000457012 610 ntBASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 SCARNA2-201ENST00000458748 420 ntBASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 AL357033.4-201ENST00000617703 1807 ntBASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RTCBQ9Y3I0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 AC116407.3-201ENST00000623905 1129 ntBASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RTCBQ9Y3I0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 RBM17P3-201ENST00000417687 1192 ntBASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 HNRNPDP1-201ENST00000439535 754 ntBASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 MTDHP3-201ENST00000594186 672 ntBASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.35■■□□□ 1.33
RTCBQ9Y3I0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 TP73-AS1-210ENST00000637775 1455 ntBASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.34■■□□□ 1.33
RTCBQ9Y3I0 AL163051.1-201ENST00000569214 1512 ntBASIC23.33■■□□□ 1.33
RTCBQ9Y3I0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RTCBQ9Y3I0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTCBQ9Y3I0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTCBQ9Y3I0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
RTCBQ9Y3I0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RTCBQ9Y3I0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms