Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL20A1Q9P218 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.98■□□□□ 0.95
COL20A1Q9P218 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL20A1Q9P218 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.98■□□□□ 0.95
COL20A1Q9P218 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.98■□□□□ 0.95
COL20A1Q9P218 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL20A1Q9P218 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL20A1Q9P218 IGHGP-201ENST00000390555 1178 ntBASIC20.98■□□□□ 0.95
COL20A1Q9P218 AP000593.1-201ENST00000393668 712 ntBASIC20.98■□□□□ 0.95
COL20A1Q9P218 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL20A1Q9P218 TPSP2-201ENST00000561760 610 ntBASIC20.98■□□□□ 0.95
COL20A1Q9P218 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.98■□□□□ 0.95
COL20A1Q9P218 AC024563.2-201ENST00000603282 481 ntBASIC20.98■□□□□ 0.95
COL20A1Q9P218 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.98■□□□□ 0.95
COL20A1Q9P218 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL20A1Q9P218 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL20A1Q9P218 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL20A1Q9P218 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.98■□□□□ 0.95
COL20A1Q9P218 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.98■□□□□ 0.95
COL20A1Q9P218 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL20A1Q9P218 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 AL450487.1-201ENST00000426799 995 ntBASIC20.97■□□□□ 0.95
COL20A1Q9P218 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.97■□□□□ 0.95
COL20A1Q9P218 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL20A1Q9P218 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 GPR32P1-201ENST00000601788 811 ntBASIC20.96■□□□□ 0.95
COL20A1Q9P218 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 KRT18P1-202ENST00000452408 1331 ntBASIC20.96■□□□□ 0.95
COL20A1Q9P218 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.96■□□□□ 0.95
COL20A1Q9P218 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL20A1Q9P218 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL20A1Q9P218 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL20A1Q9P218 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL20A1Q9P218 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL20A1Q9P218 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.95■□□□□ 0.94
COL20A1Q9P218 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL20A1Q9P218 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL20A1Q9P218 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL20A1Q9P218 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL20A1Q9P218 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL20A1Q9P218 DRAXINP1-201ENST00000437611 948 ntBASIC20.94■□□□□ 0.94
COL20A1Q9P218 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 MIR3652-201ENST00000579335 131 ntBASIC20.94■□□□□ 0.94
COL20A1Q9P218 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL20A1Q9P218 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
COL20A1Q9P218 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL20A1Q9P218 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms