Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 AC117947.1-201ENST00000427448 529 ntBASIC21.53■■□□□ 1.04
RBM28Q9NW13 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 AC009065.1-201ENST00000564055 1225 ntBASIC21.53■■□□□ 1.04
RBM28Q9NW13 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 AC010240.3-201ENST00000607688 395 ntBASIC21.53■■□□□ 1.04
RBM28Q9NW13 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 AL163051.1-201ENST00000569214 1512 ntBASIC21.53■■□□□ 1.04
RBM28Q9NW13 AC126763.1-201ENST00000552015 2118 ntBASIC21.53■■□□□ 1.04
RBM28Q9NW13 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RBM28Q9NW13 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.53■■□□□ 1.04
RBM28Q9NW13 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RBM28Q9NW13 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RBM28Q9NW13 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RBM28Q9NW13 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RBM28Q9NW13 YBX1P2-201ENST00000489612 999 ntBASIC21.52■■□□□ 1.04
RBM28Q9NW13 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 GCSHP2-201ENST00000560971 527 ntBASIC21.52■■□□□ 1.04
RBM28Q9NW13 RN7SL850P-201ENST00000579959 291 ntBASIC21.52■■□□□ 1.04
RBM28Q9NW13 AC139887.4-201ENST00000607877 719 ntBASIC21.52■■□□□ 1.04
RBM28Q9NW13 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RBM28Q9NW13 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RBM28Q9NW13 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RBM28Q9NW13 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RBM28Q9NW13 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.03
RBM28Q9NW13 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RBM28Q9NW13 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RBM28Q9NW13 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.51■■□□□ 1.03
RBM28Q9NW13 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.51■■□□□ 1.03
RBM28Q9NW13 AL441883.1-201ENST00000566170 1045 ntBASIC21.51■■□□□ 1.03
RBM28Q9NW13 AC006011.2-201ENST00000621313 1158 ntBASIC21.51■■□□□ 1.03
RBM28Q9NW13 AC011558.1-201ENST00000623459 338 ntBASIC21.51■■□□□ 1.03
RBM28Q9NW13 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC21.51■■□□□ 1.03
RBM28Q9NW13 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
RBM28Q9NW13 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.51■■□□□ 1.03
RBM28Q9NW13 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RBM28Q9NW13 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RBM28Q9NW13 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.5■■□□□ 1.03
RBM28Q9NW13 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.5■■□□□ 1.03
RBM28Q9NW13 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.5■■□□□ 1.03
RBM28Q9NW13 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.5■■□□□ 1.03
RBM28Q9NW13 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.5■■□□□ 1.03
RBM28Q9NW13 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.5■■□□□ 1.03
RBM28Q9NW13 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.5■■□□□ 1.03
RBM28Q9NW13 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
RBM28Q9NW13 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms