Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 CHCHD2P8-201ENST00000429873 447 ntBASIC19.2■□□□□ 0.66
HPS4Q9NQG7 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 AC104390.1-201ENST00000555663 520 ntBASIC19.2■□□□□ 0.66
HPS4Q9NQG7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 AC010240.3-201ENST00000607688 395 ntBASIC19.2■□□□□ 0.66
HPS4Q9NQG7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HPS4Q9NQG7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 BX323043.1-201ENST00000641006 1765 ntBASIC19.19■□□□□ 0.66
HPS4Q9NQG7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 HOXB1-202ENST00000577092 1414 ntBASIC19.19■□□□□ 0.66
HPS4Q9NQG7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 TSPY22P-201ENST00000427496 604 ntBASIC19.19■□□□□ 0.66
HPS4Q9NQG7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 RN7SL510P-201ENST00000581311 263 ntBASIC19.19■□□□□ 0.66
HPS4Q9NQG7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 AC018445.3-201ENST00000624177 1945 ntBASIC19.19■□□□□ 0.66
HPS4Q9NQG7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
HPS4Q9NQG7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 KRT8P7-201ENST00000533003 1432 ntBASIC19.18■□□□□ 0.66
HPS4Q9NQG7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 FEM1AP3-201ENST00000403722 1741 ntBASIC19.18■□□□□ 0.66
HPS4Q9NQG7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 UNC93B7-201ENST00000509439 705 ntBASIC19.18■□□□□ 0.66
HPS4Q9NQG7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HPS4Q9NQG7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 KRT8P32-201ENST00000512863 1461 ntBASIC19.17■□□□□ 0.66
HPS4Q9NQG7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 MIR564-202ENST00000385049 94 ntBASIC19.17■□□□□ 0.66
HPS4Q9NQG7 AC246785.2-201ENST00000432512 513 ntBASIC19.17■□□□□ 0.66
HPS4Q9NQG7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HPS4Q9NQG7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.16■□□□□ 0.66
HPS4Q9NQG7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms