Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 WWOX-216ENST00000569818 525 ntBASIC19.95■□□□□ 0.78
SIX2Q9NPC8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIX2Q9NPC8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SIX2Q9NPC8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.93■□□□□ 0.78
SIX2Q9NPC8 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.93■□□□□ 0.78
SIX2Q9NPC8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 TSPY14P-201ENST00000303979 915 ntBASIC19.93■□□□□ 0.78
SIX2Q9NPC8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 KRT17P2-201ENST00000300992 1314 ntBASIC19.93■□□□□ 0.78
SIX2Q9NPC8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SIX2Q9NPC8 HOXB1-202ENST00000577092 1414 ntBASIC19.93■□□□□ 0.78
SIX2Q9NPC8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 SDHAP2-201ENST00000455183 2001 ntBASIC19.92■□□□□ 0.78
SIX2Q9NPC8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 AC068880.1-201ENST00000507289 2297 ntBASIC19.92■□□□□ 0.78
SIX2Q9NPC8 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SIX2Q9NPC8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.91■□□□□ 0.78
SIX2Q9NPC8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX2Q9NPC8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX2Q9NPC8 CCR12P-201ENST00000446203 998 ntBASIC19.91■□□□□ 0.78
SIX2Q9NPC8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIX2Q9NPC8 BX088651.1-201ENST00000540551 451 ntBASIC19.91■□□□□ 0.78
SIX2Q9NPC8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SIX2Q9NPC8 AC010947.1-201ENST00000623454 693 ntBASIC19.91■□□□□ 0.78
SIX2Q9NPC8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SIX2Q9NPC8 AL163051.1-201ENST00000569214 1512 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms