Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.28■□□□□ 0.84
HIPK3Q9H422 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
HIPK3Q9H422 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK3Q9H422 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK3Q9H422 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.27■□□□□ 0.84
HIPK3Q9H422 FEM1AP3-201ENST00000403722 1741 ntBASIC20.27■□□□□ 0.84
HIPK3Q9H422 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.27■□□□□ 0.84
HIPK3Q9H422 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
HIPK3Q9H422 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK3Q9H422 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK3Q9H422 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK3Q9H422 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK3Q9H422 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK3Q9H422 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIPK3Q9H422 RNPS1P1-201ENST00000507437 918 ntBASIC20.27■□□□□ 0.84
HIPK3Q9H422 MIR5100-201ENST00000579544 119 ntBASIC20.27■□□□□ 0.84
HIPK3Q9H422 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
HIPK3Q9H422 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIPK3Q9H422 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIPK3Q9H422 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIPK3Q9H422 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIPK3Q9H422 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HIPK3Q9H422 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.27■□□□□ 0.83
HIPK3Q9H422 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.26■□□□□ 0.83
HIPK3Q9H422 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.26■□□□□ 0.83
HIPK3Q9H422 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 MIR1233-2-201ENST00000408138 82 ntBASIC20.26■□□□□ 0.83
HIPK3Q9H422 MIR1233-1-201ENST00000408722 82 ntBASIC20.26■□□□□ 0.83
HIPK3Q9H422 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 AC096582.2-201ENST00000510860 516 ntBASIC20.26■□□□□ 0.83
HIPK3Q9H422 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.26■□□□□ 0.83
HIPK3Q9H422 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.26■□□□□ 0.83
HIPK3Q9H422 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.26■□□□□ 0.83
HIPK3Q9H422 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.26■□□□□ 0.83
HIPK3Q9H422 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.26■□□□□ 0.83
HIPK3Q9H422 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HIPK3Q9H422 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
HIPK3Q9H422 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIPK3Q9H422 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIPK3Q9H422 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIPK3Q9H422 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 POLD2P1-201ENST00000511220 997 ntBASIC20.25■□□□□ 0.83
HIPK3Q9H422 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HIPK3Q9H422 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HIPK3Q9H422 AC106730.1-201ENST00000566722 1090 ntBASIC20.25■□□□□ 0.83
HIPK3Q9H422 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIPK3Q9H422 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.25■□□□□ 0.83
HIPK3Q9H422 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 AC243591.1-201ENST00000452967 1364 ntBASIC20.24■□□□□ 0.83
HIPK3Q9H422 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.24■□□□□ 0.83
HIPK3Q9H422 AC008608.2-201ENST00000606089 416 ntBASIC20.24■□□□□ 0.83
HIPK3Q9H422 AC114341.1-201ENST00000618070 349 ntBASIC20.24■□□□□ 0.83
HIPK3Q9H422 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIPK3Q9H422 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HIPK3Q9H422 TREX1-205ENST00000625293 1783 ntBASIC20.23■□□□□ 0.83
HIPK3Q9H422 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIPK3Q9H422 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.23■□□□□ 0.83
HIPK3Q9H422 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.23■□□□□ 0.83
HIPK3Q9H422 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms