Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 IKBKGP1-201ENST00000612193 1073 ntBASIC18.12■□□□□ 0.49
EBF4Q9BQW3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 AC138932.1-201ENST00000534164 6830 ntBASIC18.12■□□□□ 0.49
EBF4Q9BQW3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EBF4Q9BQW3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 AC090340.1-201ENST00000620778 4980 ntBASIC18.11■□□□□ 0.49
EBF4Q9BQW3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EBF4Q9BQW3 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 PP12613-201ENST00000424958 2230 ntBASIC18.1■□□□□ 0.49
EBF4Q9BQW3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 AC108860.2-201ENST00000562760 2183 ntBASIC18.1■□□□□ 0.49
EBF4Q9BQW3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 KRT8P11-201ENST00000409686 1436 ntBASIC18.1■□□□□ 0.49
EBF4Q9BQW3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EBF4Q9BQW3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 Z85996.1-201ENST00000494644 937 ntBASIC18.09■□□□□ 0.49
EBF4Q9BQW3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
EBF4Q9BQW3 AC083880.1-201ENST00000608266 535 ntBASIC18.09■□□□□ 0.49
EBF4Q9BQW3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms