Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 NOC2LP2-201ENST00000407594 1944 ntBASIC14.04□□□□□ -0.16
AP1S3Q96PC3 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 AC008894.3-201ENST00000624324 3103 ntBASIC14.04□□□□□ -0.16
AP1S3Q96PC3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
AP1S3Q96PC3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 AC016769.1-201ENST00000409132 1010 ntBASIC14.03□□□□□ -0.16
AP1S3Q96PC3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 Z98044.1-201ENST00000632503 1764 ntBASIC14.03□□□□□ -0.16
AP1S3Q96PC3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.03□□□□□ -0.16
AP1S3Q96PC3 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 AC141586.5-201ENST00000624546 2050 ntBASIC14.02□□□□□ -0.16
AP1S3Q96PC3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC14.02□□□□□ -0.16
AP1S3Q96PC3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms