Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 AL356309.3-201ENST00000624132 1934 ntBASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 FEM1AP4-201ENST00000443167 1987 ntBASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 AP005212.1-201ENST00000581547 1997 ntBASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DCHS1Q96JQ0 MRPL20P1-201ENST00000400819 433 ntBASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 UGT1A2P-201ENST00000454886 866 ntBASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 AC024563.2-201ENST00000603282 481 ntBASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 AC007225.1-201ENST00000566331 1836 ntBASIC17.71■□□□□ 0.43
DCHS1Q96JQ0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DCHS1Q96JQ0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DCHS1Q96JQ0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.71■□□□□ 0.42
DCHS1Q96JQ0 AC109322.1-201ENST00000524499 1264 ntBASIC17.71■□□□□ 0.42
DCHS1Q96JQ0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.71■□□□□ 0.42
DCHS1Q96JQ0 AC092902.6-201ENST00000641783 218 ntBASIC17.71■□□□□ 0.42
DCHS1Q96JQ0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.71■□□□□ 0.42
DCHS1Q96JQ0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
DCHS1Q96JQ0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 SDHAP1-207ENST00000440850 2000 ntBASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 AP005018.1-201ENST00000525475 301 ntBASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 AP002414.1-201ENST00000391405 1147 ntBASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 AL359881.2-201ENST00000602973 570 ntBASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.7■□□□□ 0.42
DCHS1Q96JQ0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 AC093520.2-201ENST00000561830 333 ntBASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 AP000344.2-201ENST00000512987 629 ntBASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 AC104390.1-201ENST00000555663 520 ntBASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 KRT8P7-201ENST00000533003 1432 ntBASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
DCHS1Q96JQ0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms