Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CLDN23Q96B33 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN23Q96B33 IRX1P1-201ENST00000438849 1838 ntBASIC18.51■□□□□ 0.55
CLDN23Q96B33 AC092667.1-201ENST00000434301 2586 ntBASIC18.51■□□□□ 0.55
CLDN23Q96B33 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 AC112777.1-201ENST00000540175 1423 ntBASIC18.51■□□□□ 0.55
CLDN23Q96B33 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN23Q96B33 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN23Q96B33 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN23Q96B33 HMGN1P19-201ENST00000436976 333 ntBASIC18.51■□□□□ 0.55
CLDN23Q96B33 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN23Q96B33 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN23Q96B33 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN23Q96B33 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CLDN23Q96B33 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN23Q96B33 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN23Q96B33 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN23Q96B33 AC104109.2-201ENST00000602919 1418 ntBASIC18.5■□□□□ 0.55
CLDN23Q96B33 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN23Q96B33 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN23Q96B33 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN23Q96B33 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.5■□□□□ 0.55
CLDN23Q96B33 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN23Q96B33 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.5■□□□□ 0.55
CLDN23Q96B33 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN23Q96B33 AL591424.1-201ENST00000442569 1213 ntBASIC18.5■□□□□ 0.55
CLDN23Q96B33 KRT18P41-201ENST00000518924 1277 ntBASIC18.5■□□□□ 0.55
CLDN23Q96B33 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN23Q96B33 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN23Q96B33 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN23Q96B33 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN23Q96B33 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN23Q96B33 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CLDN23Q96B33 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN23Q96B33 AL163051.1-201ENST00000569214 1512 ntBASIC18.49■□□□□ 0.55
CLDN23Q96B33 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 AC009533.2-201ENST00000543664 586 ntBASIC18.49■□□□□ 0.55
CLDN23Q96B33 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 AC008687.5-201ENST00000593746 558 ntBASIC18.49■□□□□ 0.55
CLDN23Q96B33 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 AL356488.2-201ENST00000602755 427 ntBASIC18.49■□□□□ 0.55
CLDN23Q96B33 AC140113.2-201ENST00000604370 208 ntBASIC18.49■□□□□ 0.55
CLDN23Q96B33 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 LINC01521-201ENST00000504184 1943 ntBASIC18.49■□□□□ 0.55
CLDN23Q96B33 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN23Q96B33 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CLDN23Q96B33 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN23Q96B33 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CLDN23Q96B33 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN23Q96B33 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN23Q96B33 RPSAP43-201ENST00000402237 625 ntBASIC18.48■□□□□ 0.55
CLDN23Q96B33 AC068472.1-201ENST00000474589 881 ntBASIC18.48■□□□□ 0.55
CLDN23Q96B33 AC034105.1-201ENST00000563488 319 ntBASIC18.48■□□□□ 0.55
CLDN23Q96B33 AC021087.4-201ENST00000563761 564 ntBASIC18.48■□□□□ 0.55
CLDN23Q96B33 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN23Q96B33 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.48■□□□□ 0.55
CLDN23Q96B33 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 INTS4P1-201ENST00000438455 1935 ntBASIC18.48■□□□□ 0.55
CLDN23Q96B33 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDN23Q96B33 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 FP475955.4-201ENST00000623131 1990 ntBASIC18.48■□□□□ 0.55
CLDN23Q96B33 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN23Q96B33 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms