Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.46■□□□□ 0.87
KLHDC9Q8NEP7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 RCN1P2-201ENST00000398357 915 ntBASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 AC093909.1-201ENST00000504731 1122 ntBASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 AC113404.2-201ENST00000507884 177 ntBASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 AL049840.3-201ENST00000602669 611 ntBASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 AL355877.3-201ENST00000622820 899 ntBASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KLHDC9Q8NEP7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 MTMR9LP-203ENST00000426597 1545 ntBASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 AC005336.2-201ENST00000593183 939 ntBASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 MIR7706-201ENST00000613747 67 ntBASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KLHDC9Q8NEP7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 FGFR3P6-201ENST00000457012 610 ntBASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KLHDC9Q8NEP7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms