Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 CYGB-205ENST00000590175 830 ntTSL 3 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC27.47■■□□□ 1.99
ABCA6Q8N139 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
ABCA6Q8N139 PWWP2AP1-201ENST00000429776 2273 ntBASIC27.47■■□□□ 1.99
ABCA6Q8N139 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ABCA6Q8N139 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
ABCA6Q8N139 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
ABCA6Q8N139 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC27.46■■□□□ 1.99
ABCA6Q8N139 AC004967.1-201ENST00000453589 447 ntBASIC27.46■■□□□ 1.99
ABCA6Q8N139 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
ABCA6Q8N139 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC27.46■■□□□ 1.99
ABCA6Q8N139 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
ABCA6Q8N139 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
ABCA6Q8N139 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
ABCA6Q8N139 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC27.45■■□□□ 1.99
ABCA6Q8N139 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
ABCA6Q8N139 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC27.45■■□□□ 1.99
ABCA6Q8N139 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC27.45■■□□□ 1.99
ABCA6Q8N139 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC27.45■■□□□ 1.99
ABCA6Q8N139 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
ABCA6Q8N139 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC27.45■■□□□ 1.99
ABCA6Q8N139 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC27.45■■□□□ 1.98
ABCA6Q8N139 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 RBSN-204ENST00000449050 903 ntTSL 2 BASIC27.45■■□□□ 1.98
ABCA6Q8N139 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC27.45■■□□□ 1.98
ABCA6Q8N139 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
ABCA6Q8N139 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
ABCA6Q8N139 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC27.44■■□□□ 1.98
ABCA6Q8N139 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC27.44■■□□□ 1.98
ABCA6Q8N139 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 AC092910.1-201ENST00000482027 1129 ntBASIC27.44■■□□□ 1.98
ABCA6Q8N139 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC27.44■■□□□ 1.98
ABCA6Q8N139 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC27.44■■□□□ 1.98
ABCA6Q8N139 CAND2-206ENST00000626378 333 ntTSL 5 BASIC27.44■■□□□ 1.98
ABCA6Q8N139 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
ABCA6Q8N139 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC27.44■■□□□ 1.98
ABCA6Q8N139 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA6Q8N139 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
ABCA6Q8N139 FEM1AP3-201ENST00000403722 1741 ntBASIC27.43■■□□□ 1.98
ABCA6Q8N139 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
ABCA6Q8N139 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
ABCA6Q8N139 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA6Q8N139 HS6ST1P1-201ENST00000481504 1234 ntBASIC27.43■■□□□ 1.98
ABCA6Q8N139 LINC02084-201ENST00000606069 1096 ntBASIC27.43■■□□□ 1.98
ABCA6Q8N139 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA6Q8N139 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA6Q8N139 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC27.43■■□□□ 1.98
ABCA6Q8N139 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA6Q8N139 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA6Q8N139 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA6Q8N139 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
ABCA6Q8N139 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC27.42■■□□□ 1.98
ABCA6Q8N139 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC27.42■■□□□ 1.98
ABCA6Q8N139 RNA5SP415-201ENST00000517246 115 ntBASIC27.42■■□□□ 1.98
ABCA6Q8N139 DHDH-204ENST00000523250 634 ntTSL 5 BASIC27.42■■□□□ 1.98
ABCA6Q8N139 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ABCA6Q8N139 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC27.42■■□□□ 1.98
ABCA6Q8N139 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC27.42■■□□□ 1.98
ABCA6Q8N139 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ABCA6Q8N139 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC27.42■■□□□ 1.98
ABCA6Q8N139 HEIH-201ENST00000623091 1652 ntBASIC27.42■■□□□ 1.98
ABCA6Q8N139 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
ABCA6Q8N139 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
ABCA6Q8N139 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
ABCA6Q8N139 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 AC008735.5-201ENST00000623544 497 ntBASIC27.41■■□□□ 1.98
ABCA6Q8N139 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA6Q8N139 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA6Q8N139 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA6Q8N139 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ABCA6Q8N139 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms