Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 AC092338.2-201ENST00000568827 1415 ntBASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC116Q8IYX3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC116Q8IYX3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CCDC116Q8IYX3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC116Q8IYX3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC116Q8IYX3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC116Q8IYX3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC116Q8IYX3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC116Q8IYX3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 AC007663.1-201ENST00000438948 1240 ntBASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 AC112777.1-201ENST00000540175 1423 ntBASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC116Q8IYX3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 TSPY14P-201ENST00000303979 915 ntBASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 INGX-201ENST00000359239 846 ntBASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 BX088651.1-201ENST00000540551 451 ntBASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 NAPSB-206ENST00000562112 1266 ntBASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 MIR3180-5-201ENST00000583743 153 ntBASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 AC010947.1-201ENST00000623454 693 ntBASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 MYC-208ENST00000641036 567 ntBASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC116Q8IYX3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 AC073592.3-201ENST00000625118 1834 ntBASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 KRT8P45-201ENST00000414328 1447 ntBASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC116Q8IYX3 EGLN1P1-201ENST00000531623 762 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms