Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 AL354751.1-201ENST00000412768 1863 ntBASIC16.85■□□□□ 0.29
ATG4DQ86TL0 TSPY14P-201ENST00000303979 915 ntBASIC16.85■□□□□ 0.29
ATG4DQ86TL0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 MIR1224-201ENST00000408193 85 ntBASIC16.85■□□□□ 0.29
ATG4DQ86TL0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 AC007663.1-201ENST00000438948 1240 ntBASIC16.85■□□□□ 0.29
ATG4DQ86TL0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 RN7SL850P-201ENST00000579959 291 ntBASIC16.85■□□□□ 0.29
ATG4DQ86TL0 AC145285.6-201ENST00000604632 637 ntBASIC16.85■□□□□ 0.29
ATG4DQ86TL0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 KRT8P50-201ENST00000562022 1438 ntBASIC16.85■□□□□ 0.29
ATG4DQ86TL0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 AL162741.1-201ENST00000565563 1558 ntBASIC16.85■□□□□ 0.29
ATG4DQ86TL0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ATG4DQ86TL0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 CR769767.2-201ENST00000622735 460 ntBASIC16.84■□□□□ 0.29
ATG4DQ86TL0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 LINC01568-207ENST00000641790 1380 ntBASIC16.84■□□□□ 0.29
ATG4DQ86TL0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATG4DQ86TL0 AL390961.4-201ENST00000623958 2535 ntBASIC16.84■□□□□ 0.29
ATG4DQ86TL0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATG4DQ86TL0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.83■□□□□ 0.29
ATG4DQ86TL0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
ATG4DQ86TL0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.83■□□□□ 0.29
ATG4DQ86TL0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 EGLN1P1-201ENST00000531623 762 ntBASIC16.83■□□□□ 0.28
ATG4DQ86TL0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 NAPSB-206ENST00000562112 1266 ntBASIC16.83■□□□□ 0.28
ATG4DQ86TL0 WWOX-216ENST00000569818 525 ntBASIC16.83■□□□□ 0.28
ATG4DQ86TL0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 AC010331.1-201ENST00000611423 582 ntBASIC16.83■□□□□ 0.28
ATG4DQ86TL0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 AC010653.2-201ENST00000623505 997 ntBASIC16.83■□□□□ 0.28
ATG4DQ86TL0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATG4DQ86TL0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 INGX-201ENST00000359239 846 ntBASIC16.82■□□□□ 0.28
ATG4DQ86TL0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.82■□□□□ 0.28
ATG4DQ86TL0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms