Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 KRT18P41-201ENST00000518924 1277 ntBASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 AF238378.1-201ENST00000526806 358 ntBASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 AC009065.1-201ENST00000564055 1225 ntBASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 AC004263.2-201ENST00000617183 678 ntBASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM71Q2Q1W2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 SAPCD2P3-201ENST00000455031 850 ntBASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 AC023511.2-201ENST00000618803 211 ntBASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRIM71Q2Q1W2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 NUS1P2-201ENST00000417358 873 ntBASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 RNA5SP419-201ENST00000515908 135 ntBASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 TP73-AS1-207ENST00000624167 988 ntBASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.23■□□□□ 0.83
TRIM71Q2Q1W2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 VENTXP7-201ENST00000475503 772 ntBASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 AC079776.4-201ENST00000511039 504 ntBASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 AL671883.3-201ENST00000603274 991 ntBASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 AL163051.1-201ENST00000569214 1512 ntBASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.22■□□□□ 0.83
TRIM71Q2Q1W2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms