Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 AL357033.4-201ENST00000617703 1807 ntBASIC17.65■□□□□ 0.42
SKP1P63208 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SKP1P63208 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.65■□□□□ 0.42
SKP1P63208 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SKP1P63208 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SKP1P63208 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.64■□□□□ 0.42
SKP1P63208 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SKP1P63208 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
SKP1P63208 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SKP1P63208 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SKP1P63208 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.64■□□□□ 0.41
SKP1P63208 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.64■□□□□ 0.41
SKP1P63208 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.64■□□□□ 0.41
SKP1P63208 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SKP1P63208 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.64■□□□□ 0.41
SKP1P63208 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SKP1P63208 KRT18P21-201ENST00000515767 1272 ntBASIC17.64■□□□□ 0.41
SKP1P63208 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.64■□□□□ 0.41
SKP1P63208 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.64■□□□□ 0.41
SKP1P63208 RN7SL850P-201ENST00000579959 291 ntBASIC17.64■□□□□ 0.41
SKP1P63208 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.64■□□□□ 0.41
SKP1P63208 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.64■□□□□ 0.41
SKP1P63208 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SKP1P63208 AC093525.10-201ENST00000625130 1569 ntBASIC17.64■□□□□ 0.41
SKP1P63208 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
SKP1P63208 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.64■□□□□ 0.41
SKP1P63208 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SKP1P63208 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.64■□□□□ 0.41
SKP1P63208 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SKP1P63208 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.63■□□□□ 0.41
SKP1P63208 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.63■□□□□ 0.41
SKP1P63208 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
SKP1P63208 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.63■□□□□ 0.41
SKP1P63208 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SKP1P63208 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.63■□□□□ 0.41
SKP1P63208 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 RNF152P1-201ENST00000397754 604 ntBASIC17.63■□□□□ 0.41
SKP1P63208 AK4P3-201ENST00000418260 669 ntBASIC17.63■□□□□ 0.41
SKP1P63208 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.63■□□□□ 0.41
SKP1P63208 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.63■□□□□ 0.41
SKP1P63208 HOMER2P1-201ENST00000455653 964 ntBASIC17.63■□□□□ 0.41
SKP1P63208 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.63■□□□□ 0.41
SKP1P63208 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SKP1P63208 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.63■□□□□ 0.41
SKP1P63208 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SKP1P63208 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SKP1P63208 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SKP1P63208 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.63■□□□□ 0.41
SKP1P63208 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.63■□□□□ 0.41
SKP1P63208 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SKP1P63208 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.62■□□□□ 0.41
SKP1P63208 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SKP1P63208 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SKP1P63208 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SKP1P63208 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.62■□□□□ 0.41
SKP1P63208 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SKP1P63208 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SKP1P63208 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SKP1P63208 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SKP1P63208 AC092647.4-201ENST00000457211 535 ntBASIC17.62■□□□□ 0.41
SKP1P63208 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.62■□□□□ 0.41
SKP1P63208 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.62■□□□□ 0.41
SKP1P63208 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SKP1P63208 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.62■□□□□ 0.41
SKP1P63208 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms