Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN4P51793 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN4P51793 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN4P51793 AL158211.5-201ENST00000623583 2518 ntBASIC19.53■□□□□ 0.72
CLCN4P51793 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CLCN4P51793 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN4P51793 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.53■□□□□ 0.72
CLCN4P51793 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN4P51793 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN4P51793 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN4P51793 AL022342.1-201ENST00000400363 863 ntBASIC19.53■□□□□ 0.72
CLCN4P51793 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
CLCN4P51793 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCN4P51793 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN4P51793 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.53■□□□□ 0.72
CLCN4P51793 AL121912.1-201ENST00000603683 238 ntBASIC19.53■□□□□ 0.72
CLCN4P51793 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.53■□□□□ 0.72
CLCN4P51793 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.53■□□□□ 0.72
CLCN4P51793 AC068587.9-201ENST00000641814 219 ntBASIC19.53■□□□□ 0.72
CLCN4P51793 FP475955.4-201ENST00000623131 1990 ntBASIC19.53■□□□□ 0.72
CLCN4P51793 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.53■□□□□ 0.72
CLCN4P51793 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLCN4P51793 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN4P51793 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.52■□□□□ 0.72
CLCN4P51793 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLCN4P51793 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.52■□□□□ 0.72
CLCN4P51793 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.52■□□□□ 0.72
CLCN4P51793 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN4P51793 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.52■□□□□ 0.72
CLCN4P51793 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.52■□□□□ 0.72
CLCN4P51793 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.52■□□□□ 0.72
CLCN4P51793 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLCN4P51793 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLCN4P51793 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.52■□□□□ 0.72
CLCN4P51793 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CLCN4P51793 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.52■□□□□ 0.71
CLCN4P51793 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
CLCN4P51793 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CLCN4P51793 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLCN4P51793 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN4P51793 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
CLCN4P51793 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN4P51793 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.51■□□□□ 0.71
CLCN4P51793 AL662844.1-201ENST00000546340 181 ntBASIC19.51■□□□□ 0.71
CLCN4P51793 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCN4P51793 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN4P51793 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLCN4P51793 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLCN4P51793 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.51■□□□□ 0.71
CLCN4P51793 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.51■□□□□ 0.71
CLCN4P51793 AC141586.3-201ENST00000562166 1838 ntBASIC19.51■□□□□ 0.71
CLCN4P51793 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CLCN4P51793 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN4P51793 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN4P51793 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN4P51793 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN4P51793 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN4P51793 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN4P51793 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN4P51793 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN4P51793 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN4P51793 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLCN4P51793 MRPL3P1-201ENST00000400109 1033 ntBASIC19.5■□□□□ 0.71
CLCN4P51793 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CLCN4P51793 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN4P51793 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN4P51793 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN4P51793 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN4P51793 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN4P51793 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLCN4P51793 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN4P51793 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN4P51793 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN4P51793 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms