Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.17■□□□□ 0.18
HCFC1P51610 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 AL512353.2-201ENST00000448759 1962 ntBASIC16.17■□□□□ 0.18
HCFC1P51610 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC1P51610 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC1P51610 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HCFC1P51610 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC1P51610 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC1P51610 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.17■□□□□ 0.18
HCFC1P51610 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC1P51610 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HCFC1P51610 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.17■□□□□ 0.18
HCFC1P51610 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.17■□□□□ 0.18
HCFC1P51610 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCFC1P51610 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
HCFC1P51610 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 IGHGP-201ENST00000390555 1178 ntBASIC16.16■□□□□ 0.18
HCFC1P51610 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HCFC1P51610 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.16■□□□□ 0.18
HCFC1P51610 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.16■□□□□ 0.18
HCFC1P51610 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.16■□□□□ 0.18
HCFC1P51610 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.16■□□□□ 0.18
HCFC1P51610 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.16■□□□□ 0.18
HCFC1P51610 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.16■□□□□ 0.18
HCFC1P51610 AC006333.2-201ENST00000607957 2099 ntBASIC16.16■□□□□ 0.18
HCFC1P51610 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.16■□□□□ 0.18
HCFC1P51610 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.16■□□□□ 0.18
HCFC1P51610 GUSBP12-201ENST00000513727 720 ntBASIC16.16■□□□□ 0.18
HCFC1P51610 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HCFC1P51610 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.16■□□□□ 0.18
HCFC1P51610 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
HCFC1P51610 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HCFC1P51610 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
HCFC1P51610 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HCFC1P51610 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
HCFC1P51610 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.15■□□□□ 0.18
HCFC1P51610 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
HCFC1P51610 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC1P51610 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 MIR574-201ENST00000385209 96 ntBASIC16.15■□□□□ 0.18
HCFC1P51610 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.15■□□□□ 0.18
HCFC1P51610 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.15■□□□□ 0.18
HCFC1P51610 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC1P51610 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC1P51610 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
HCFC1P51610 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.15■□□□□ 0.18
HCFC1P51610 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 IL9RP2-201ENST00000423948 1312 ntBASIC16.15■□□□□ 0.18
HCFC1P51610 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC1P51610 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HCFC1P51610 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC16.15■□□□□ 0.18
HCFC1P51610 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.14■□□□□ 0.18
HCFC1P51610 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.14■□□□□ 0.17
HCFC1P51610 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.14■□□□□ 0.17
HCFC1P51610 AC005336.2-201ENST00000593183 939 ntBASIC16.14■□□□□ 0.17
HCFC1P51610 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.14■□□□□ 0.17
HCFC1P51610 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HCFC1P51610 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.14■□□□□ 0.17
HCFC1P51610 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms