Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KNTC1P50748 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 HNRNPDP1-201ENST00000439535 754 ntBASIC17.63■□□□□ 0.41
KNTC1P50748 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.63■□□□□ 0.41
KNTC1P50748 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
KNTC1P50748 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.63■□□□□ 0.41
KNTC1P50748 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.63■□□□□ 0.41
KNTC1P50748 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.63■□□□□ 0.41
KNTC1P50748 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KNTC1P50748 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.63■□□□□ 0.41
KNTC1P50748 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 AC005104.2-201ENST00000427818 678 ntBASIC17.63■□□□□ 0.41
KNTC1P50748 IGHV3-22-201ENST00000520721 359 ntBASIC17.63■□□□□ 0.41
KNTC1P50748 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.63■□□□□ 0.41
KNTC1P50748 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KNTC1P50748 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KNTC1P50748 TREX1-205ENST00000625293 1783 ntBASIC17.63■□□□□ 0.41
KNTC1P50748 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.63■□□□□ 0.41
KNTC1P50748 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KNTC1P50748 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.62■□□□□ 0.41
KNTC1P50748 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KNTC1P50748 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.62■□□□□ 0.41
KNTC1P50748 AC022898.2-201ENST00000616822 1312 ntBASIC17.62■□□□□ 0.41
KNTC1P50748 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KNTC1P50748 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 KRT18P41-201ENST00000518924 1277 ntBASIC17.62■□□□□ 0.41
KNTC1P50748 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.62■□□□□ 0.41
KNTC1P50748 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
KNTC1P50748 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KNTC1P50748 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
KNTC1P50748 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
KNTC1P50748 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
KNTC1P50748 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
KNTC1P50748 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.61■□□□□ 0.41
KNTC1P50748 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.61■□□□□ 0.41
KNTC1P50748 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
KNTC1P50748 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.61■□□□□ 0.41
KNTC1P50748 AC140113.2-201ENST00000604370 208 ntBASIC17.61■□□□□ 0.41
KNTC1P50748 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.61■□□□□ 0.41
KNTC1P50748 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.61■□□□□ 0.41
KNTC1P50748 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.61■□□□□ 0.41
KNTC1P50748 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
KNTC1P50748 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
KNTC1P50748 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.61■□□□□ 0.41
KNTC1P50748 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.61■□□□□ 0.41
KNTC1P50748 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KNTC1P50748 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
KNTC1P50748 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KNTC1P50748 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.6■□□□□ 0.41
KNTC1P50748 AC106730.1-201ENST00000566722 1090 ntBASIC17.6■□□□□ 0.41
KNTC1P50748 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
KNTC1P50748 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.6■□□□□ 0.41
KNTC1P50748 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KNTC1P50748 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KNTC1P50748 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.6■□□□□ 0.41
KNTC1P50748 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.6■□□□□ 0.41
KNTC1P50748 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.6■□□□□ 0.41
KNTC1P50748 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KNTC1P50748 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.6■□□□□ 0.41
KNTC1P50748 AL512353.2-201ENST00000448759 1962 ntBASIC17.6■□□□□ 0.41
KNTC1P50748 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KNTC1P50748 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms