Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CDK7P50613 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK7P50613 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK7P50613 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK7P50613 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK7P50613 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK7P50613 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.51■□□□□ 0.87
CDK7P50613 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK7P50613 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK7P50613 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDK7P50613 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK7P50613 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CDK7P50613 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK7P50613 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK7P50613 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDK7P50613 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDK7P50613 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.51■□□□□ 0.87
CDK7P50613 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDK7P50613 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK7P50613 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK7P50613 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK7P50613 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CDK7P50613 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK7P50613 POM121L3P-201ENST00000419331 1163 ntBASIC20.5■□□□□ 0.87
CDK7P50613 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK7P50613 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.5■□□□□ 0.87
CDK7P50613 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK7P50613 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.5■□□□□ 0.87
CDK7P50613 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.5■□□□□ 0.87
CDK7P50613 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.5■□□□□ 0.87
CDK7P50613 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.5■□□□□ 0.87
CDK7P50613 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
CDK7P50613 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDK7P50613 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.5■□□□□ 0.87
CDK7P50613 KRT89P-201ENST00000620027 1478 ntBASIC20.5■□□□□ 0.87
CDK7P50613 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDK7P50613 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.49■□□□□ 0.87
CDK7P50613 AL353692.3-201ENST00000407031 1396 ntBASIC20.49■□□□□ 0.87
CDK7P50613 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.49■□□□□ 0.87
CDK7P50613 NUS1P2-201ENST00000417358 873 ntBASIC20.49■□□□□ 0.87
CDK7P50613 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK7P50613 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 VENTXP7-201ENST00000475503 772 ntBASIC20.49■□□□□ 0.87
CDK7P50613 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK7P50613 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.49■□□□□ 0.87
CDK7P50613 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.49■□□□□ 0.87
CDK7P50613 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.49■□□□□ 0.87
CDK7P50613 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 AL773604.1-201ENST00000617417 272 ntBASIC20.49■□□□□ 0.87
CDK7P50613 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.49■□□□□ 0.87
CDK7P50613 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.49■□□□□ 0.87
CDK7P50613 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.49■□□□□ 0.87
CDK7P50613 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDK7P50613 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.48■□□□□ 0.87
CDK7P50613 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CDK7P50613 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.48■□□□□ 0.87
CDK7P50613 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.48■□□□□ 0.87
CDK7P50613 FAM197Y8-203ENST00000450145 560 ntBASIC20.48■□□□□ 0.87
CDK7P50613 SLC25A1P1-201ENST00000528351 927 ntBASIC20.48■□□□□ 0.87
CDK7P50613 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.48■□□□□ 0.87
CDK7P50613 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDK7P50613 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDK7P50613 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
CDK7P50613 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDK7P50613 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK7P50613 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.47■□□□□ 0.87
CDK7P50613 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.47■□□□□ 0.87
CDK7P50613 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK7P50613 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDK7P50613 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms