Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TUBP50607 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBP50607 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TUBP50607 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.57■□□□□ 0.72
TUBP50607 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TUBP50607 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
TUBP50607 AC120498.9-201ENST00000339021 3867 ntBASIC19.57■□□□□ 0.72
TUBP50607 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBP50607 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBP50607 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TUBP50607 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.56■□□□□ 0.72
TUBP50607 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.56■□□□□ 0.72
TUBP50607 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
TUBP50607 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TUBP50607 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.56■□□□□ 0.72
TUBP50607 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.56■□□□□ 0.72
TUBP50607 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.56■□□□□ 0.72
TUBP50607 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.56■□□□□ 0.72
TUBP50607 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.56■□□□□ 0.72
TUBP50607 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TUBP50607 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.56■□□□□ 0.72
TUBP50607 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TUBP50607 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TUBP50607 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.55■□□□□ 0.72
TUBP50607 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBP50607 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBP50607 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBP50607 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBP50607 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
TUBP50607 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TUBP50607 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
TUBP50607 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBP50607 AL671277.2-201ENST00000458060 996 ntBASIC19.55■□□□□ 0.72
TUBP50607 AC034232.1-201ENST00000506026 1064 ntBASIC19.55■□□□□ 0.72
TUBP50607 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.55■□□□□ 0.72
TUBP50607 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.55■□□□□ 0.72
TUBP50607 KRT8P7-201ENST00000533003 1432 ntBASIC19.55■□□□□ 0.72
TUBP50607 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBP50607 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TUBP50607 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TUBP50607 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.55■□□□□ 0.72
TUBP50607 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TUBP50607 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TUBP50607 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.54■□□□□ 0.72
TUBP50607 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.54■□□□□ 0.72
TUBP50607 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.54■□□□□ 0.72
TUBP50607 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.54■□□□□ 0.72
TUBP50607 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.54■□□□□ 0.72
TUBP50607 KRT18P38-201ENST00000449496 1282 ntBASIC19.54■□□□□ 0.72
TUBP50607 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.54■□□□□ 0.72
TUBP50607 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.54■□□□□ 0.72
TUBP50607 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.54■□□□□ 0.72
TUBP50607 AC091076.1-201ENST00000610741 619 ntBASIC19.54■□□□□ 0.72
TUBP50607 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.54■□□□□ 0.72
TUBP50607 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 FZD10-202ENST00000539839 3282 ntBASIC19.54■□□□□ 0.72
TUBP50607 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
TUBP50607 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.54■□□□□ 0.72
TUBP50607 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TUBP50607 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TUBP50607 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TUBP50607 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.53■□□□□ 0.72
TUBP50607 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TUBP50607 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms