Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPT1AP50416 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CPT1AP50416 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CPT1AP50416 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.57■□□□□ 0.88
CPT1AP50416 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CPT1AP50416 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CPT1AP50416 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.57■□□□□ 0.88
CPT1AP50416 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPT1AP50416 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.57■□□□□ 0.88
CPT1AP50416 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPT1AP50416 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.57■□□□□ 0.88
CPT1AP50416 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CPT1AP50416 AL163051.1-201ENST00000569214 1512 ntBASIC20.57■□□□□ 0.88
CPT1AP50416 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CPT1AP50416 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.57■□□□□ 0.88
CPT1AP50416 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.56■□□□□ 0.88
CPT1AP50416 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CPT1AP50416 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CPT1AP50416 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CPT1AP50416 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.56■□□□□ 0.88
CPT1AP50416 MINOS1P3-201ENST00000457048 203 ntBASIC20.56■□□□□ 0.88
CPT1AP50416 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.56■□□□□ 0.88
CPT1AP50416 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.56■□□□□ 0.88
CPT1AP50416 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.56■□□□□ 0.88
CPT1AP50416 AP005901.3-202ENST00000581653 237 ntBASIC20.56■□□□□ 0.88
CPT1AP50416 SLC25A6P4-201ENST00000586535 553 ntBASIC20.56■□□□□ 0.88
CPT1AP50416 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.56■□□□□ 0.88
CPT1AP50416 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.56■□□□□ 0.88
CPT1AP50416 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.56■□□□□ 0.88
CPT1AP50416 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CPT1AP50416 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CPT1AP50416 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CPT1AP50416 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CPT1AP50416 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.55■□□□□ 0.88
CPT1AP50416 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 MTMR9LP-203ENST00000426597 1545 ntBASIC20.55■□□□□ 0.88
CPT1AP50416 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CPT1AP50416 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.55■□□□□ 0.88
CPT1AP50416 SAPCD2P3-201ENST00000455031 850 ntBASIC20.55■□□□□ 0.88
CPT1AP50416 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
CPT1AP50416 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.55■□□□□ 0.88
CPT1AP50416 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CPT1AP50416 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.55■□□□□ 0.88
CPT1AP50416 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CPT1AP50416 AL032819.2-201ENST00000624543 2162 ntBASIC20.55■□□□□ 0.88
CPT1AP50416 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CPT1AP50416 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CPT1AP50416 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 AL022342.1-201ENST00000400363 863 ntBASIC20.54■□□□□ 0.88
CPT1AP50416 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.54■□□□□ 0.88
CPT1AP50416 NUS1P2-201ENST00000417358 873 ntBASIC20.54■□□□□ 0.88
CPT1AP50416 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.54■□□□□ 0.88
CPT1AP50416 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.54■□□□□ 0.88
CPT1AP50416 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 AC008687.5-201ENST00000593746 558 ntBASIC20.54■□□□□ 0.88
CPT1AP50416 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CPT1AP50416 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.54■□□□□ 0.88
CPT1AP50416 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPT1AP50416 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CPT1AP50416 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.54■□□□□ 0.88
CPT1AP50416 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CPT1AP50416 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPT1AP50416 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPT1AP50416 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPT1AP50416 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms