Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.93■□□□□ 0.94
CENPFP49454 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.93■□□□□ 0.94
CENPFP49454 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CENPFP49454 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPFP49454 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CENPFP49454 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.93■□□□□ 0.94
CENPFP49454 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.93■□□□□ 0.94
CENPFP49454 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.93■□□□□ 0.94
CENPFP49454 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.93■□□□□ 0.94
CENPFP49454 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CENPFP49454 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CENPFP49454 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.92■□□□□ 0.94
CENPFP49454 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CENPFP49454 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPFP49454 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.92■□□□□ 0.94
CENPFP49454 AC004832.2-201ENST00000426397 482 ntBASIC20.92■□□□□ 0.94
CENPFP49454 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CENPFP49454 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPFP49454 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.92■□□□□ 0.94
CENPFP49454 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.92■□□□□ 0.94
CENPFP49454 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.92■□□□□ 0.94
CENPFP49454 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPFP49454 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.92■□□□□ 0.94
CENPFP49454 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CENPFP49454 HLA-J-203ENST00000494367 1087 ntBASIC20.92■□□□□ 0.94
CENPFP49454 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPFP49454 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CENPFP49454 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPFP49454 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CENPFP49454 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CENPFP49454 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CENPFP49454 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CENPFP49454 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CENPFP49454 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.91■□□□□ 0.94
CENPFP49454 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
CENPFP49454 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CENPFP49454 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CENPFP49454 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
CENPFP49454 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.91■□□□□ 0.94
CENPFP49454 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CENPFP49454 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CENPFP49454 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.91■□□□□ 0.94
CENPFP49454 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CENPFP49454 KRT18P3-201ENST00000451602 1288 ntBASIC20.91■□□□□ 0.94
CENPFP49454 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CENPFP49454 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.91■□□□□ 0.94
CENPFP49454 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CENPFP49454 AFG3L1P-217ENST00000557444 2447 ntBASIC20.91■□□□□ 0.94
CENPFP49454 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CENPFP49454 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CENPFP49454 RPS2P28-201ENST00000314255 741 ntBASIC20.91■□□□□ 0.94
CENPFP49454 AL591684.3-201ENST00000605187 298 ntBASIC20.91■□□□□ 0.94
CENPFP49454 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CENPFP49454 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPFP49454 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPFP49454 METTL21AP1-201ENST00000438852 635 ntBASIC20.9■□□□□ 0.94
CENPFP49454 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.9■□□□□ 0.94
CENPFP49454 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.9■□□□□ 0.94
CENPFP49454 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CENPFP49454 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CENPFP49454 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CENPFP49454 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.9■□□□□ 0.94
CENPFP49454 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CENPFP49454 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.9■□□□□ 0.94
CENPFP49454 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CENPFP49454 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CENPFP49454 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.89■□□□□ 0.94
CENPFP49454 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CENPFP49454 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CENPFP49454 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.89■□□□□ 0.94
CENPFP49454 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CENPFP49454 AL596442.2-201ENST00000610240 980 ntBASIC20.89■□□□□ 0.94
CENPFP49454 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.89■□□□□ 0.94
CENPFP49454 AC020907.5-201ENST00000624372 1936 ntBASIC20.89■□□□□ 0.94
CENPFP49454 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.89■□□□□ 0.94
CENPFP49454 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CENPFP49454 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.89■□□□□ 0.93
CENPFP49454 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.89■□□□□ 0.93
CENPFP49454 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.89■□□□□ 0.93
CENPFP49454 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.89■□□□□ 0.93
CENPFP49454 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CENPFP49454 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.89■□□□□ 0.93
CENPFP49454 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.89■□□□□ 0.93
CENPFP49454 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
CENPFP49454 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
CENPFP49454 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.89■□□□□ 0.93
CENPFP49454 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CENPFP49454 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CENPFP49454 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.89■□□□□ 0.93
CENPFP49454 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CENPFP49454 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CENPFP49454 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CENPFP49454 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.89■□□□□ 0.93
CENPFP49454 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CENPFP49454 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.89■□□□□ 0.93
CENPFP49454 AP005117.1-201ENST00000584346 1413 ntBASIC20.88■□□□□ 0.93
CENPFP49454 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.88■□□□□ 0.93
CENPFP49454 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CENPFP49454 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.88■□□□□ 0.93
CENPFP49454 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms