Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN7P35236 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PTPN7P35236 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PTPN7P35236 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 AC008764.6-201ENST00000595909 2069 ntBASIC19.22■□□□□ 0.67
PTPN7P35236 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTPN7P35236 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 AP005242.2-201ENST00000580065 1175 ntBASIC19.22■□□□□ 0.67
PTPN7P35236 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPN7P35236 REXO1L10P-201ENST00000615707 1290 ntBASIC19.22■□□□□ 0.67
PTPN7P35236 REXO1L12P-201ENST00000622156 912 ntBASIC19.22■□□□□ 0.67
PTPN7P35236 AL049637.2-201ENST00000641778 930 ntBASIC19.22■□□□□ 0.67
PTPN7P35236 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTPN7P35236 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PTPN7P35236 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN7P35236 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PTPN7P35236 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPN7P35236 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPN7P35236 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN7P35236 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPN7P35236 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTPN7P35236 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN7P35236 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 AC068880.1-201ENST00000507289 2297 ntBASIC19.21■□□□□ 0.67
PTPN7P35236 ESPNP-201ENST00000270691 2015 ntBASIC19.21■□□□□ 0.67
PTPN7P35236 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN7P35236 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN7P35236 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN7P35236 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 SLC25A6P5-201ENST00000435663 894 ntBASIC19.21■□□□□ 0.67
PTPN7P35236 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPN7P35236 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN7P35236 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPN7P35236 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPN7P35236 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN7P35236 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN7P35236 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN7P35236 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.2■□□□□ 0.66
PTPN7P35236 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN7P35236 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN7P35236 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTPN7P35236 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PTPN7P35236 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PTPN7P35236 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN7P35236 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN7P35236 MIR4674-201ENST00000582457 87 ntBASIC19.2■□□□□ 0.66
PTPN7P35236 MIR3180-5-201ENST00000583743 153 ntBASIC19.2■□□□□ 0.66
PTPN7P35236 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.2■□□□□ 0.66
PTPN7P35236 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPN7P35236 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPN7P35236 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PTPN7P35236 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN7P35236 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PTPN7P35236 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPN7P35236 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN7P35236 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN7P35236 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN7P35236 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTPN7P35236 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN7P35236 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPN7P35236 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPN7P35236 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPN7P35236 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPN7P35236 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms