Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXA11P31270 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.07■□□□□ 0.8
HOXA11P31270 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA11P31270 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA11P31270 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA11P31270 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HOXA11P31270 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.07■□□□□ 0.8
HOXA11P31270 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.07■□□□□ 0.8
HOXA11P31270 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA11P31270 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA11P31270 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HOXA11P31270 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXA11P31270 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA11P31270 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA11P31270 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXA11P31270 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA11P31270 DRAXINP1-201ENST00000437611 948 ntBASIC20.06■□□□□ 0.8
HOXA11P31270 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXA11P31270 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.06■□□□□ 0.8
HOXA11P31270 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXA11P31270 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HOXA11P31270 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA11P31270 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.06■□□□□ 0.8
HOXA11P31270 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.06■□□□□ 0.8
HOXA11P31270 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA11P31270 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HOXA11P31270 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 KRT89P-201ENST00000620027 1478 ntBASIC20.05■□□□□ 0.8
HOXA11P31270 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 KRT18P1-202ENST00000452408 1331 ntBASIC20.05■□□□□ 0.8
HOXA11P31270 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
HOXA11P31270 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
HOXA11P31270 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.05■□□□□ 0.8
HOXA11P31270 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HOXA11P31270 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.05■□□□□ 0.8
HOXA11P31270 TPSP2-201ENST00000561760 610 ntBASIC20.05■□□□□ 0.8
HOXA11P31270 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
HOXA11P31270 GPR32P1-201ENST00000601788 811 ntBASIC20.05■□□□□ 0.8
HOXA11P31270 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
HOXA11P31270 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
HOXA11P31270 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
HOXA11P31270 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
HOXA11P31270 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HOXA11P31270 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HOXA11P31270 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HOXA11P31270 MYLKP1-201ENST00000509077 1580 ntBASIC20.04■□□□□ 0.8
HOXA11P31270 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA11P31270 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA11P31270 SDHAP2-201ENST00000455183 2001 ntBASIC20.04■□□□□ 0.8
HOXA11P31270 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA11P31270 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA11P31270 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA11P31270 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXA11P31270 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXA11P31270 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA11P31270 MIR149-201ENST00000384879 89 ntBASIC20.04■□□□□ 0.8
HOXA11P31270 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXA11P31270 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HOXA11P31270 AL450487.1-201ENST00000426799 995 ntBASIC20.04■□□□□ 0.8
HOXA11P31270 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA11P31270 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.04■□□□□ 0.8
HOXA11P31270 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
HOXA11P31270 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.04■□□□□ 0.8
HOXA11P31270 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.04■□□□□ 0.8
HOXA11P31270 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA11P31270 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HOXA11P31270 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HOXA11P31270 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HOXA11P31270 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA11P31270 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA11P31270 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA11P31270 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA11P31270 AC112777.1-201ENST00000540175 1423 ntBASIC20.03■□□□□ 0.8
HOXA11P31270 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA11P31270 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA11P31270 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA11P31270 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.03■□□□□ 0.8
HOXA11P31270 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA11P31270 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
HOXA11P31270 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA11P31270 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.03■□□□□ 0.8
HOXA11P31270 MIR3652-201ENST00000579335 131 ntBASIC20.03■□□□□ 0.8
HOXA11P31270 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.03■□□□□ 0.8
HOXA11P31270 AL121894.2-201ENST00000602977 491 ntBASIC20.03■□□□□ 0.8
HOXA11P31270 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA11P31270 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HOXA11P31270 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms