Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTGFP29279 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
CTGFP29279 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.92■□□□□ 0.94
CTGFP29279 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTGFP29279 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTGFP29279 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTGFP29279 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTGFP29279 INTS4P1-201ENST00000438455 1935 ntBASIC20.91■□□□□ 0.94
CTGFP29279 AC092910.1-201ENST00000482027 1129 ntBASIC20.91■□□□□ 0.94
CTGFP29279 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CTGFP29279 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.91■□□□□ 0.94
CTGFP29279 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTGFP29279 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CTGFP29279 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CTGFP29279 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.91■□□□□ 0.94
CTGFP29279 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.91■□□□□ 0.94
CTGFP29279 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTGFP29279 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTGFP29279 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.9■□□□□ 0.94
CTGFP29279 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.9■□□□□ 0.94
CTGFP29279 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTGFP29279 AC112777.1-201ENST00000540175 1423 ntBASIC20.9■□□□□ 0.94
CTGFP29279 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTGFP29279 RPS2P28-201ENST00000314255 741 ntBASIC20.9■□□□□ 0.94
CTGFP29279 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.9■□□□□ 0.94
CTGFP29279 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTGFP29279 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.9■□□□□ 0.94
CTGFP29279 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.9■□□□□ 0.94
CTGFP29279 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.9■□□□□ 0.94
CTGFP29279 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.9■□□□□ 0.94
CTGFP29279 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.9■□□□□ 0.94
CTGFP29279 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CTGFP29279 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.9■□□□□ 0.94
CTGFP29279 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTGFP29279 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTGFP29279 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTGFP29279 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTGFP29279 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTGFP29279 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTGFP29279 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CTGFP29279 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTGFP29279 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTGFP29279 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTGFP29279 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CTGFP29279 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.89■□□□□ 0.93
CTGFP29279 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.89■□□□□ 0.93
CTGFP29279 KRT18P3-201ENST00000451602 1288 ntBASIC20.89■□□□□ 0.93
CTGFP29279 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.89■□□□□ 0.93
CTGFP29279 RNA5SP415-201ENST00000517246 115 ntBASIC20.89■□□□□ 0.93
CTGFP29279 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.89■□□□□ 0.93
CTGFP29279 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.89■□□□□ 0.93
CTGFP29279 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.89■□□□□ 0.93
CTGFP29279 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.89■□□□□ 0.93
CTGFP29279 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.89■□□□□ 0.93
CTGFP29279 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTGFP29279 AP005117.1-201ENST00000584346 1413 ntBASIC20.88■□□□□ 0.93
CTGFP29279 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.88■□□□□ 0.93
CTGFP29279 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.88■□□□□ 0.93
CTGFP29279 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.88■□□□□ 0.93
CTGFP29279 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.88■□□□□ 0.93
CTGFP29279 AC068472.1-201ENST00000474589 881 ntBASIC20.88■□□□□ 0.93
CTGFP29279 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 Z83851.2-201ENST00000609564 659 ntBASIC20.88■□□□□ 0.93
CTGFP29279 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.88■□□□□ 0.93
CTGFP29279 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.88■□□□□ 0.93
CTGFP29279 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.88■□□□□ 0.93
CTGFP29279 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.88■□□□□ 0.93
CTGFP29279 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CTGFP29279 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.88■□□□□ 0.93
CTGFP29279 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CTGFP29279 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CTGFP29279 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
CTGFP29279 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTGFP29279 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTGFP29279 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.87■□□□□ 0.93
CTGFP29279 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CTGFP29279 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CTGFP29279 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms