Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ANO7L1-203ENST00000602586 1720 ntBASIC18.12■□□□□ 0.49
PCNAP12004 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PCNAP12004 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
PCNAP12004 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.11■□□□□ 0.49
PCNAP12004 AC090164.3-201ENST00000610780 2143 ntBASIC18.11■□□□□ 0.49
PCNAP12004 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCNAP12004 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
PCNAP12004 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.11■□□□□ 0.49
PCNAP12004 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.11■□□□□ 0.49
PCNAP12004 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.11■□□□□ 0.49
PCNAP12004 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.11■□□□□ 0.49
PCNAP12004 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCNAP12004 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 TSPY7P-201ENST00000431358 1114 ntBASIC18.11■□□□□ 0.49
PCNAP12004 MFAP1P1-201ENST00000442257 1255 ntBASIC18.11■□□□□ 0.49
PCNAP12004 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.11■□□□□ 0.49
PCNAP12004 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.11■□□□□ 0.49
PCNAP12004 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.11■□□□□ 0.49
PCNAP12004 AC097488.1-201ENST00000507834 756 ntBASIC18.11■□□□□ 0.49
PCNAP12004 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.11■□□□□ 0.49
PCNAP12004 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.11■□□□□ 0.49
PCNAP12004 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.11■□□□□ 0.49
PCNAP12004 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.11■□□□□ 0.49
PCNAP12004 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PCNAP12004 KRT8P3-201ENST00000519669 1449 ntBASIC18.11■□□□□ 0.49
PCNAP12004 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.11■□□□□ 0.49
PCNAP12004 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PCNAP12004 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCNAP12004 LTB4R2-202ENST00000528054 3092 ntBASIC18.1■□□□□ 0.49
PCNAP12004 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.1■□□□□ 0.49
PCNAP12004 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 HEIH-201ENST00000623091 1652 ntBASIC18.1■□□□□ 0.49
PCNAP12004 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.1■□□□□ 0.49
PCNAP12004 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.1■□□□□ 0.49
PCNAP12004 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 AP003071.4-201ENST00000562276 1284 ntBASIC18.1■□□□□ 0.49
PCNAP12004 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.1■□□□□ 0.49
PCNAP12004 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.1■□□□□ 0.49
PCNAP12004 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.1■□□□□ 0.49
PCNAP12004 DGCR10-201ENST00000609839 495 ntBASIC18.1■□□□□ 0.49
PCNAP12004 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.1■□□□□ 0.49
PCNAP12004 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.1■□□□□ 0.49
PCNAP12004 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCNAP12004 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
PCNAP12004 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCNAP12004 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCNAP12004 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.09■□□□□ 0.49
PCNAP12004 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCNAP12004 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
PCNAP12004 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.09■□□□□ 0.49
PCNAP12004 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCNAP12004 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.09■□□□□ 0.49
PCNAP12004 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCNAP12004 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms