Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHGAP10645 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CHGAP10645 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CHGAP10645 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC26.7■■□□□ 1.86
CHGAP10645 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC26.69■■□□□ 1.86
CHGAP10645 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHGAP10645 LINC01521-201ENST00000504184 1943 ntBASIC26.69■■□□□ 1.86
CHGAP10645 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC26.69■■□□□ 1.86
CHGAP10645 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC26.69■■□□□ 1.86
CHGAP10645 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHGAP10645 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHGAP10645 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC26.69■■□□□ 1.86
CHGAP10645 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC26.69■■□□□ 1.86
CHGAP10645 AC011840.4-201ENST00000578471 627 ntBASIC26.69■■□□□ 1.86
CHGAP10645 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CHGAP10645 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHGAP10645 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CHGAP10645 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC26.69■■□□□ 1.86
CHGAP10645 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHGAP10645 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHGAP10645 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC26.68■■□□□ 1.86
CHGAP10645 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CHGAP10645 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHGAP10645 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHGAP10645 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC26.68■■□□□ 1.86
CHGAP10645 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC26.68■■□□□ 1.86
CHGAP10645 AL671883.3-201ENST00000603274 991 ntBASIC26.68■■□□□ 1.86
CHGAP10645 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHGAP10645 Z98044.1-201ENST00000632503 1764 ntBASIC26.68■■□□□ 1.86
CHGAP10645 AL158211.5-201ENST00000623583 2518 ntBASIC26.68■■□□□ 1.86
CHGAP10645 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
CHGAP10645 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
CHGAP10645 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC26.67■■□□□ 1.86
CHGAP10645 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHGAP10645 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHGAP10645 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHGAP10645 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC26.67■■□□□ 1.86
CHGAP10645 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC26.67■■□□□ 1.86
CHGAP10645 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHGAP10645 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CHGAP10645 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHGAP10645 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHGAP10645 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
CHGAP10645 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC26.67■■□□□ 1.86
CHGAP10645 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHGAP10645 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC26.67■■□□□ 1.86
CHGAP10645 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC26.67■■□□□ 1.86
CHGAP10645 IGHV3OR16-7-201ENST00000604106 360 ntBASIC26.67■■□□□ 1.86
CHGAP10645 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC26.67■■□□□ 1.86
CHGAP10645 NME4-212ENST00000621774 904 ntTSL 3 BASIC26.67■■□□□ 1.86
CHGAP10645 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHGAP10645 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
CHGAP10645 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
CHGAP10645 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHGAP10645 TEX30-205ENST00000376029 959 ntTSL 2 BASIC26.66■■□□□ 1.86
CHGAP10645 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC26.66■■□□□ 1.86
CHGAP10645 CDV3-207ENST00000508481 661 ntTSL 3 BASIC26.66■■□□□ 1.86
CHGAP10645 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC26.66■■□□□ 1.86
CHGAP10645 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC26.66■■□□□ 1.86
CHGAP10645 BX640515.1-201ENST00000617215 977 ntBASIC26.66■■□□□ 1.86
CHGAP10645 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC26.66■■□□□ 1.86
CHGAP10645 AC141586.3-201ENST00000562166 1838 ntBASIC26.66■■□□□ 1.86
CHGAP10645 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHGAP10645 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHGAP10645 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHGAP10645 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHGAP10645 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHGAP10645 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.65■■□□□ 1.86
CHGAP10645 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC26.65■■□□□ 1.86
CHGAP10645 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC26.65■■□□□ 1.86
CHGAP10645 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 AC099343.3-201ENST00000605834 2503 ntBASIC26.65■■□□□ 1.86
CHGAP10645 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC26.65■■□□□ 1.86
CHGAP10645 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC26.65■■□□□ 1.86
CHGAP10645 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CHGAP10645 AF228730.7-201ENST00000641842 219 ntBASIC26.65■■□□□ 1.86
CHGAP10645 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CHGAP10645 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC26.65■■□□□ 1.86
CHGAP10645 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC26.65■■□□□ 1.86
CHGAP10645 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 AL357033.4-201ENST00000617703 1807 ntBASIC26.65■■□□□ 1.86
CHGAP10645 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC26.65■■□□□ 1.86
CHGAP10645 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 KRT8P50-201ENST00000562022 1438 ntBASIC26.65■■□□□ 1.86
CHGAP10645 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CHGAP10645 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHGAP10645 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHGAP10645 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHGAP10645 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms