Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.85■□□□□ 0.29
CEACAM4O75871 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM4O75871 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CEACAM4O75871 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM4O75871 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM4O75871 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CEACAM4O75871 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.85■□□□□ 0.29
CEACAM4O75871 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM4O75871 AP001005.1-201ENST00000571755 1248 ntBASIC16.85■□□□□ 0.29
CEACAM4O75871 MIR5100-201ENST00000579544 119 ntBASIC16.85■□□□□ 0.29
CEACAM4O75871 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.85■□□□□ 0.29
CEACAM4O75871 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.85■□□□□ 0.29
CEACAM4O75871 AC008687.5-201ENST00000593746 558 ntBASIC16.85■□□□□ 0.29
CEACAM4O75871 AL773604.1-201ENST00000617417 272 ntBASIC16.85■□□□□ 0.29
CEACAM4O75871 AC114341.1-201ENST00000618070 349 ntBASIC16.85■□□□□ 0.29
CEACAM4O75871 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM4O75871 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM4O75871 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.85■□□□□ 0.29
CEACAM4O75871 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM4O75871 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CEACAM4O75871 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.85■□□□□ 0.29
CEACAM4O75871 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CEACAM4O75871 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CEACAM4O75871 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.84■□□□□ 0.29
CEACAM4O75871 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.84■□□□□ 0.29
CEACAM4O75871 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.84■□□□□ 0.29
CEACAM4O75871 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 AL591684.3-201ENST00000605187 298 ntBASIC16.84■□□□□ 0.29
CEACAM4O75871 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CEACAM4O75871 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.84■□□□□ 0.29
CEACAM4O75871 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.84■□□□□ 0.29
CEACAM4O75871 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CEACAM4O75871 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CEACAM4O75871 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CEACAM4O75871 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.83■□□□□ 0.29
CEACAM4O75871 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CEACAM4O75871 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CEACAM4O75871 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM4O75871 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CEACAM4O75871 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM4O75871 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CEACAM4O75871 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM4O75871 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM4O75871 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM4O75871 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
CEACAM4O75871 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM4O75871 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.83■□□□□ 0.28
CEACAM4O75871 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CEACAM4O75871 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM4O75871 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CEACAM4O75871 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CEACAM4O75871 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.83■□□□□ 0.28
CEACAM4O75871 AC117500.6-201ENST00000624871 588 ntBASIC16.83■□□□□ 0.28
CEACAM4O75871 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM4O75871 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.82■□□□□ 0.28
CEACAM4O75871 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM4O75871 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM4O75871 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM4O75871 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CEACAM4O75871 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM4O75871 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.82■□□□□ 0.28
CEACAM4O75871 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM4O75871 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
CEACAM4O75871 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM4O75871 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CEACAM4O75871 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CEACAM4O75871 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.82■□□□□ 0.28
CEACAM4O75871 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CEACAM4O75871 PMS2P1-201ENST00000431037 1228 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms