Protein–RNA interactions for Protein: O60383

GDF9, Growth/differentiation factor 9, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9O60383 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.05■□□□□ 0.48
GDF9O60383 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.05■□□□□ 0.48
GDF9O60383 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.05■□□□□ 0.48
GDF9O60383 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GDF9O60383 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
GDF9O60383 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.05■□□□□ 0.48
GDF9O60383 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.05■□□□□ 0.48
GDF9O60383 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.05■□□□□ 0.48
GDF9O60383 KRT18P3-201ENST00000451602 1288 ntBASIC18.05■□□□□ 0.48
GDF9O60383 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.05■□□□□ 0.48
GDF9O60383 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GDF9O60383 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.05■□□□□ 0.48
GDF9O60383 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GDF9O60383 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.05■□□□□ 0.48
GDF9O60383 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF9O60383 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.04■□□□□ 0.48
GDF9O60383 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.04■□□□□ 0.48
GDF9O60383 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GDF9O60383 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
GDF9O60383 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF9O60383 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF9O60383 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF9O60383 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF9O60383 RCN1P2-201ENST00000398357 915 ntBASIC18.04■□□□□ 0.48
GDF9O60383 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.04■□□□□ 0.48
GDF9O60383 AL591424.1-201ENST00000442569 1213 ntBASIC18.04■□□□□ 0.48
GDF9O60383 DNAJB3-202ENST00000449667 1266 ntBASIC18.04■□□□□ 0.48
GDF9O60383 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.04■□□□□ 0.48
GDF9O60383 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.04■□□□□ 0.48
GDF9O60383 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
GDF9O60383 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.04■□□□□ 0.48
GDF9O60383 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GDF9O60383 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.04■□□□□ 0.48
GDF9O60383 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.04■□□□□ 0.48
GDF9O60383 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GDF9O60383 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF9O60383 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF9O60383 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
GDF9O60383 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.03■□□□□ 0.48
GDF9O60383 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GDF9O60383 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.03■□□□□ 0.48
GDF9O60383 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
GDF9O60383 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF9O60383 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.03■□□□□ 0.48
GDF9O60383 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.03■□□□□ 0.48
GDF9O60383 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
GDF9O60383 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GDF9O60383 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GDF9O60383 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
GDF9O60383 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.02■□□□□ 0.48
GDF9O60383 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.02■□□□□ 0.48
GDF9O60383 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.02■□□□□ 0.48
GDF9O60383 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
GDF9O60383 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GDF9O60383 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
GDF9O60383 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.02■□□□□ 0.48
GDF9O60383 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
GDF9O60383 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.02■□□□□ 0.48
GDF9O60383 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.02■□□□□ 0.48
GDF9O60383 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms