Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 AC087388.1-201ENST00000571370 1112 ntBASIC18.23■□□□□ 0.51
VEGFDO43915 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.23■□□□□ 0.51
VEGFDO43915 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.23■□□□□ 0.51
VEGFDO43915 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.23■□□□□ 0.51
VEGFDO43915 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
VEGFDO43915 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.23■□□□□ 0.51
VEGFDO43915 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VEGFDO43915 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VEGFDO43915 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VEGFDO43915 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.23■□□□□ 0.51
VEGFDO43915 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.23■□□□□ 0.51
VEGFDO43915 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VEGFDO43915 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VEGFDO43915 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VEGFDO43915 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VEGFDO43915 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
VEGFDO43915 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.22■□□□□ 0.51
VEGFDO43915 ARMC10P1-201ENST00000313754 855 ntBASIC18.22■□□□□ 0.51
VEGFDO43915 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.22■□□□□ 0.51
VEGFDO43915 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.22■□□□□ 0.51
VEGFDO43915 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
VEGFDO43915 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.22■□□□□ 0.51
VEGFDO43915 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.22■□□□□ 0.51
VEGFDO43915 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VEGFDO43915 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.22■□□□□ 0.51
VEGFDO43915 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VEGFDO43915 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.22■□□□□ 0.51
VEGFDO43915 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VEGFDO43915 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VEGFDO43915 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VEGFDO43915 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.21■□□□□ 0.51
VEGFDO43915 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.21■□□□□ 0.51
VEGFDO43915 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
VEGFDO43915 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.21■□□□□ 0.51
VEGFDO43915 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.21■□□□□ 0.51
VEGFDO43915 AL031133.1-201ENST00000406807 723 ntBASIC18.21■□□□□ 0.51
VEGFDO43915 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VEGFDO43915 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.21■□□□□ 0.51
VEGFDO43915 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VEGFDO43915 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.21■□□□□ 0.51
VEGFDO43915 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
VEGFDO43915 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
VEGFDO43915 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.21■□□□□ 0.51
VEGFDO43915 HYMAI.1-201ENST00000620949 238 ntBASIC18.21■□□□□ 0.51
VEGFDO43915 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VEGFDO43915 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VEGFDO43915 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
VEGFDO43915 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VEGFDO43915 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.2■□□□□ 0.5
VEGFDO43915 PVRIG2P-201ENST00000435460 978 ntBASIC18.2■□□□□ 0.5
VEGFDO43915 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.2■□□□□ 0.5
VEGFDO43915 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.2■□□□□ 0.5
VEGFDO43915 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.2■□□□□ 0.5
VEGFDO43915 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.2■□□□□ 0.5
VEGFDO43915 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.2■□□□□ 0.5
VEGFDO43915 LINC01311-201ENST00000565162 1445 ntBASIC18.2■□□□□ 0.5
VEGFDO43915 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
VEGFDO43915 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VEGFDO43915 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.19■□□□□ 0.5
VEGFDO43915 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VEGFDO43915 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VEGFDO43915 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.19■□□□□ 0.5
VEGFDO43915 HBZP1-201ENST00000354915 429 ntBASIC18.19■□□□□ 0.5
VEGFDO43915 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.19■□□□□ 0.5
VEGFDO43915 MIR149-201ENST00000384879 89 ntBASIC18.19■□□□□ 0.5
VEGFDO43915 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.19■□□□□ 0.5
VEGFDO43915 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.19■□□□□ 0.5
VEGFDO43915 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.19■□□□□ 0.5
VEGFDO43915 AC098818.2-201ENST00000564925 2320 ntBASIC18.19■□□□□ 0.5
VEGFDO43915 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 AL121956.5-201ENST00000625261 221 ntBASIC18.19■□□□□ 0.5
VEGFDO43915 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.19■□□□□ 0.5
VEGFDO43915 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.19■□□□□ 0.5
VEGFDO43915 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VEGFDO43915 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VEGFDO43915 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms