Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP2AO43633 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP2AO43633 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP2AO43633 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CHMP2AO43633 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP2AO43633 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP2AO43633 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.89■□□□□ 0.94
CHMP2AO43633 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHMP2AO43633 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2AO43633 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2AO43633 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHMP2AO43633 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2AO43633 AL671277.2-201ENST00000458060 996 ntBASIC20.89■□□□□ 0.93
CHMP2AO43633 RASA4DP-201ENST00000460726 1199 ntBASIC20.89■□□□□ 0.93
CHMP2AO43633 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2AO43633 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.89■□□□□ 0.93
CHMP2AO43633 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.89■□□□□ 0.93
CHMP2AO43633 AL157888.1-201ENST00000631930 593 ntBASIC20.89■□□□□ 0.93
CHMP2AO43633 MYC-208ENST00000641036 567 ntBASIC20.89■□□□□ 0.93
CHMP2AO43633 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.89■□□□□ 0.93
CHMP2AO43633 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2AO43633 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHMP2AO43633 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.89■□□□□ 0.93
CHMP2AO43633 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP2AO43633 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CHMP2AO43633 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 HOXB1-202ENST00000577092 1414 ntBASIC20.88■□□□□ 0.93
CHMP2AO43633 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2AO43633 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHMP2AO43633 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.88■□□□□ 0.93
CHMP2AO43633 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CHMP2AO43633 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2AO43633 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.88■□□□□ 0.93
CHMP2AO43633 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 STARP1-201ENST00000397973 869 ntBASIC20.88■□□□□ 0.93
CHMP2AO43633 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHMP2AO43633 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2AO43633 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2AO43633 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.88■□□□□ 0.93
CHMP2AO43633 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.88■□□□□ 0.93
CHMP2AO43633 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2AO43633 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.88■□□□□ 0.93
CHMP2AO43633 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CHMP2AO43633 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CHMP2AO43633 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2AO43633 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2AO43633 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP2AO43633 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP2AO43633 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CHMP2AO43633 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP2AO43633 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP2AO43633 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHMP2AO43633 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
CHMP2AO43633 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.87■□□□□ 0.93
CHMP2AO43633 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 AL031133.1-201ENST00000406807 723 ntBASIC20.87■□□□□ 0.93
CHMP2AO43633 AC034232.1-201ENST00000506026 1064 ntBASIC20.87■□□□□ 0.93
CHMP2AO43633 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.87■□□□□ 0.93
CHMP2AO43633 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.87■□□□□ 0.93
CHMP2AO43633 AC010240.3-201ENST00000607688 395 ntBASIC20.87■□□□□ 0.93
CHMP2AO43633 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP2AO43633 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CHMP2AO43633 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CHMP2AO43633 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP2AO43633 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CHMP2AO43633 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP2AO43633 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CHMP2AO43633 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms