Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.89■□□□□ 0.61
RIPK2O43353 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.89■□□□□ 0.61
RIPK2O43353 PRKY-204ENST00000533551 1019 ntBASIC18.89■□□□□ 0.61
RIPK2O43353 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RIPK2O43353 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.89■□□□□ 0.61
RIPK2O43353 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RIPK2O43353 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RIPK2O43353 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RIPK2O43353 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RIPK2O43353 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RIPK2O43353 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RIPK2O43353 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RIPK2O43353 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RIPK2O43353 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.89■□□□□ 0.61
RIPK2O43353 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RIPK2O43353 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.89■□□□□ 0.61
RIPK2O43353 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RIPK2O43353 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.88■□□□□ 0.61
RIPK2O43353 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.88■□□□□ 0.61
RIPK2O43353 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.88■□□□□ 0.61
RIPK2O43353 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.88■□□□□ 0.61
RIPK2O43353 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RIPK2O43353 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.88■□□□□ 0.61
RIPK2O43353 AC006970.2-201ENST00000450065 779 ntBASIC18.88■□□□□ 0.61
RIPK2O43353 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.88■□□□□ 0.61
RIPK2O43353 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RIPK2O43353 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.88■□□□□ 0.61
RIPK2O43353 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.88■□□□□ 0.61
RIPK2O43353 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
RIPK2O43353 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.88■□□□□ 0.61
RIPK2O43353 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.88■□□□□ 0.61
RIPK2O43353 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.88■□□□□ 0.61
RIPK2O43353 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RIPK2O43353 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 AC090340.1-201ENST00000620778 4980 ntBASIC18.88■□□□□ 0.61
RIPK2O43353 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RIPK2O43353 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RIPK2O43353 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.87■□□□□ 0.61
RIPK2O43353 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.87■□□□□ 0.61
RIPK2O43353 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.87■□□□□ 0.61
RIPK2O43353 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.87■□□□□ 0.61
RIPK2O43353 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.87■□□□□ 0.61
RIPK2O43353 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RIPK2O43353 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.87■□□□□ 0.61
RIPK2O43353 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.87■□□□□ 0.61
RIPK2O43353 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.87■□□□□ 0.61
RIPK2O43353 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
RIPK2O43353 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.87■□□□□ 0.61
RIPK2O43353 AC004264.1-201ENST00000608354 794 ntBASIC18.87■□□□□ 0.61
RIPK2O43353 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.87■□□□□ 0.61
RIPK2O43353 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RIPK2O43353 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 AC099398.1-201ENST00000567919 2776 ntBASIC18.87■□□□□ 0.61
RIPK2O43353 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RIPK2O43353 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RIPK2O43353 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RIPK2O43353 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.86■□□□□ 0.61
RIPK2O43353 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.86■□□□□ 0.61
RIPK2O43353 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.86■□□□□ 0.61
RIPK2O43353 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.86■□□□□ 0.61
RIPK2O43353 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.86■□□□□ 0.61
RIPK2O43353 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.86■□□□□ 0.61
RIPK2O43353 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
RIPK2O43353 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RIPK2O43353 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms