Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
FOXN1O15353 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXN1O15353 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXN1O15353 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
FOXN1O15353 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
FOXN1O15353 AP000974.1-201ENST00000623909 2387 ntBASIC22.16■■□□□ 1.14
FOXN1O15353 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.15■■□□□ 1.14
FOXN1O15353 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 ILF2-202ENST00000368681 726 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 LSM5-204ENST00000409909 740 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.15■■□□□ 1.14
FOXN1O15353 RNF126P1-202ENST00000569893 925 ntBASIC22.15■■□□□ 1.14
FOXN1O15353 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC22.15■■□□□ 1.14
FOXN1O15353 AC079602.3-201ENST00000623931 403 ntBASIC22.15■■□□□ 1.14
FOXN1O15353 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.15■■□□□ 1.14
FOXN1O15353 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
FOXN1O15353 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
FOXN1O15353 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
FOXN1O15353 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
FOXN1O15353 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
FOXN1O15353 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
FOXN1O15353 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
FOXN1O15353 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.14■■□□□ 1.13
FOXN1O15353 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC22.14■■□□□ 1.13
FOXN1O15353 CALY-203ENST00000368558 825 ntTSL 5 BASIC22.14■■□□□ 1.13
FOXN1O15353 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
FOXN1O15353 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.14■■□□□ 1.13
FOXN1O15353 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.14■■□□□ 1.13
FOXN1O15353 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC22.14■■□□□ 1.13
FOXN1O15353 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.14■■□□□ 1.13
FOXN1O15353 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.14■■□□□ 1.13
FOXN1O15353 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.14■■□□□ 1.13
FOXN1O15353 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.14■■□□□ 1.13
FOXN1O15353 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
FOXN1O15353 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC22.14■■□□□ 1.13
FOXN1O15353 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
FOXN1O15353 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
FOXN1O15353 AC018445.3-201ENST00000624177 1945 ntBASIC22.14■■□□□ 1.13
FOXN1O15353 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
FOXN1O15353 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC22.13■■□□□ 1.13
FOXN1O15353 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.13■■□□□ 1.13
FOXN1O15353 AL035633.1-201ENST00000406139 838 ntBASIC22.13■■□□□ 1.13
FOXN1O15353 GPX1P2-201ENST00000429271 606 ntBASIC22.13■■□□□ 1.13
FOXN1O15353 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.13■■□□□ 1.13
FOXN1O15353 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.13■■□□□ 1.13
FOXN1O15353 AL160286.2-201ENST00000567150 934 ntBASIC22.13■■□□□ 1.13
FOXN1O15353 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
FOXN1O15353 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
FOXN1O15353 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.13■■□□□ 1.13
FOXN1O15353 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
FOXN1O15353 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
FOXN1O15353 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 AC004967.1-201ENST00000453589 447 ntBASIC22.12■■□□□ 1.13
FOXN1O15353 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
FOXN1O15353 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms