Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 AC011840.4-201ENST00000578471 627 ntBASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SCN10AQ9Y5Y9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 KRT18P67-201ENST00000432816 1264 ntBASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 AL032819.2-201ENST00000624543 2162 ntBASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 AL163051.1-201ENST00000569214 1512 ntBASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.35■□□□□ 0.85
SCN10AQ9Y5Y9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 AC008608.2-201ENST00000606089 416 ntBASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 MIR7706-201ENST00000613747 67 ntBASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 PCDHAC2-203ENST00000615316 3011 ntBASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.34■□□□□ 0.85
SCN10AQ9Y5Y9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN10AQ9Y5Y9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.33■□□□□ 0.85
SCN10AQ9Y5Y9 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SCN10AQ9Y5Y9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.33■□□□□ 0.85
SCN10AQ9Y5Y9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SCN10AQ9Y5Y9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 AC096582.2-201ENST00000510860 516 ntBASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 IL9RP2-201ENST00000423948 1312 ntBASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SCN10AQ9Y5Y9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCN10AQ9Y5Y9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms