Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 RNPS1P1-201ENST00000507437 918 ntBASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 GZMM-202ENST00000592501 941 ntTSL 3 BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 AC064862.7-201ENST00000604520 867 ntBASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 AL138831.2-201ENST00000606564 490 ntBASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC28.07■■■□□ 2.08
CDC42BPBQ9Y5S2 HNRNPDP1-201ENST00000439535 754 ntBASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 AC073648.2-201ENST00000510116 352 ntBASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 PGAM5P1-201ENST00000518923 814 ntBASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 ANKRD20A8P-203ENST00000641373 517 ntBASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 IGHV3-22-201ENST00000520721 359 ntBASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 AP001269.4-201ENST00000609611 512 ntBASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 AL355877.3-201ENST00000622820 899 ntBASIC28.06■■■□□ 2.08
CDC42BPBQ9Y5S2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CDC42BPBQ9Y5S2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 AL024508.2-201ENST00000607749 1894 ntBASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC28.04■■■□□ 2.08
CDC42BPBQ9Y5S2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC28.03■■■□□ 2.08
CDC42BPBQ9Y5S2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 SCARNA2-201ENST00000458748 420 ntBASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
CDC42BPBQ9Y5S2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC28.01■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms