Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 GPAT2P1-201ENST00000444924 1672 ntBASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 AC016734.2-201ENST00000624325 1377 ntBASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGA9Q9Y5G4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 AC004870.1-201ENST00000315132 882 ntBASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 RN7SL510P-201ENST00000581311 263 ntBASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 AC024243.1-201ENST00000609234 778 ntBASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 NEFHP1-201ENST00000412845 2629 ntBASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGA9Q9Y5G4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 AL023284.2-201ENST00000405850 579 ntBASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 FAAHP1-202ENST00000446499 1238 ntBASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 MIR3180-1-201ENST00000580374 94 ntBASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 MIR3180-5-201ENST00000583743 153 ntBASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 MIR3180-3-201ENST00000584616 94 ntBASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGA9Q9Y5G4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms