Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC138028.4-201ENST00000564984 1845 ntBASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 TSPY21P-201ENST00000433481 731 ntBASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 SLC25A6P5-201ENST00000435663 894 ntBASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 KRT18P16-201ENST00000510337 1294 ntBASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.22■□□□□ 0.03
RCL1Q9Y2P8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 AC093677.2-201ENST00000600169 1863 ntBASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 AL512625.2-201ENST00000417533 625 ntBASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 RPS2P52-201ENST00000469610 820 ntBASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 MTMR9LP-203ENST00000426597 1545 ntBASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RCL1Q9Y2P8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
RCL1Q9Y2P8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RCL1Q9Y2P8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.21■□□□□ 0.02
RCL1Q9Y2P8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.2■□□□□ 0.02
RCL1Q9Y2P8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms